Non-Coding RNA Search

Ss1.1-rplac_7759.5

Sequence:


               
               GCTTTCTGACCCAGTCTGTCCTGTGTGTGACCTCATTTCTTCTTTGGGTCCTAATCACCT
TCTCACTTGTTTTTCTTTGGTTGTCTCTTGGGTGGAGCTTTTAAAAAACTGAGAAAGATC
ATAGAGCTTATAGTTATTACTGAATATTTGTAACTTGCTAGATCTTGCCCTAAATGCCGT
GTATCAGTATCTCTCTGCTCCTCCCGATGACCTTAGGAGGTGGGTTTATTGTCTTATTTT
GCCCAGTAGGAAACTACACTCAGAGAGTTTAGATTCATCCAGGACCTCAAATGGTAAAGC
TAAGATGTGAAACTGGATCTGTCTGATTCTAGAGCCTGTGGTCTGCCTCCCCAACTCAGA
TGTGTATAAAGCCGGCTTCTGGACCTCGTCTGGGTCTGTGTGGTGCCTGCCATCTTATTT
CCTCCAGGATAGGTGGTCACAGGACATTTGAAATACCCAGAGGCTGACACATAAAGAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTCTGACCCAGTCTGTCCTGTGTGTGACCTCATTTCTTCTTTGGGTCCTAATCACCT
TCTCACTTGTTTTTCTTTGGTTGTCTCTTGGGTGGAGCTTTTAAAAAACTGAGAAAGATC
ATAGAGCTTATAGTTATTACTGAATATTTGTAACTTGCTAGATCTTGCCCTAAATGCCGT
GTATCAGTATCTCTCTGCTCCTCCCGATGACCTTAGGAGGTGGGTTTATTGTCTTATTTT
GCCCAGTAGGAAACTACACTCAGAGAGTTTAGATTCATCCAGGACCTCAAATGGTAAAGC
TAAGATGTGAAACTGGATCTGTCTGATTCTAGAGCCTGTGGTCTGCCTCCCCAACTCAGA
TGTGTATAAAGCCGGCTTCTGGACCTCGTCTGGGTCTGTGTGGTGCCTGCCATCTTATTT
CCTCCAGGATAGGTGGTCACAGGACATTTGAAATACCCAGAGGCTGACACATAAAGAGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               15-480, gnl|bosTau2|chr15 (31829709-31830182)
               

               
               15-480, gnl|Hg17|chr11 (6193277-6192815)
               

               
               15-480, gnl|Mm7|chr7 (101438500-101438088)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-480, gnl|bosTau2|chr15 (31829709-31830182)
               

               
               15-480, gnl|Hg17|chr11 (6193277-6192815)
               

               
               15-480, gnl|Mm7|chr7 (101438500-101438088)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	15-480, gnl\|bosTau2\|chr15 (31829709-31830182)
	15-480, gnl\|Hg17\|chr11 (6193277-6192815)
	15-480, gnl\|Mm7\|chr7 (101438500-101438088)