Non-Coding RNA Search

Ss1.1-rplac_8050.5

Sequence:


               
               GAAATCAAAATCCTTTCCTCGGGGAAGTGCCGCCTGGCAGGGTTTGGACGCCTGAAGCCC
ACGTGCGCCGCCGAGTCCGAGGTGCCTGACAGCAGAGCCCGCCTGAGCCGCCACCCGTGC
TCCTCCCCGAGGAAAGGATTTTGATTTCAAAGAAAGGAAGGAAGGAAGGACAACTCCCAG
CTTCCCTCTCCCGCCCTCCCTGCTCCGGCGATCCGGCCGGGCCATGCCCAGGAAGGCGGC
GGCGGCGGCGGCGGCAGCCCAGCAGAAGGGACTTTCCTGGCAGCCCGGCGAGGAGGAGCG
CGGTCTGTGAGTTTGCTCTGCGCCGGTTCATGGTTCCTGCAAGCCCTCTAAGAGGCCGAA
CGCTGCAGTCCCTCCCCGCGCCCCGAAGAGCCTCCTGCGTTCCCTGGCTCCCTGGCCAGC
CCCGCGCCGCCCGGGCTCCGGCCGCCGCAGCCCAGTGCCCTCTGCCCGCGGCGGTGGATG
GCATGATGGTGCGGGGAAGGCACCTCGGCCTTGGCCAGCTGAGTCGCGACGGCCGCGGGG
GCGGCGGCATTGGTAGCGGCGGTGGTAGCGGGCTCCCCAGCGGCATGCCAGTGCCCCCCG
GGCGTGATGGCTAGCGGCAGCGCTGGGAAGCCCACTGGCGAGGCGGCTTCTCCGGCTCCA
GCGAGCGTCGTCGTCGGCGGGGCCTCCTCGCAGCCGCGGAAGAGGCTGGTGTCCGTCTGT
GACCACTGCAAGGGCAAGATGCAGCTGGTGGCCGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATCAAAATCCTTTCCTCGGGGAAGTGCCGCCTGGCAGGGTTTGGACGCCTGAAGCCC
ACGTGCGCCGCCGAGTCCGAGGTGCCTGACAGCAGAGCCCGCCTGAGCCGCCACCCGTGC
TCCTCCCCGAGGAAAGGATTTTGATTTCAAAGAAAGGAAGGAAGGAAGGACAACTCCCAG
CTTCCCTCTCCCGCCCTCCCTGCTCCGGCGATCCGGCCGGGCCATGCCCAGGAAGGCGGC
GGCGGCGGCGGCGGCAGCCCAGCAGAAGGGACTTTCCTGGCAGCCCGGCGAGGAGGAGCG
CGGTCTGTGAGTTTGCTCTGCGCCGGTTCATGGTTCCTGCAAGCCCTCTAAGAGGCCGAA
CGCTGCAGTCCCTCCCCGCGCCCCGAAGAGCCTCCTGCGTTCCCTGGCTCCCTGGCCAGC
CCCGCGCCGCCCGGGCTCCGGCCGCCGCAGCCCAGTGCCCTCTGCCCGCGGCGGTGGATG
GCATGATGGTGCGGGGAAGGCACCTCGGCCTTGGCCAGCTGAGTCGCGACGGCCGCGGGG
GCGGCGGCATTGGTAGCGGCGGTGGTAGCGGGCTCCCCAGCGGCATGCCAGTGCCCCCCG
GGCGTGATGGCTAGCGGCAGCGCTGGGAAGCCCACTGGCGAGGCGGCTTCTCCGGCTCCA
GCGAGCGTCGTCGTCGGCGGGGCCTCCTCGCAGCCGCGGAAGAGGCTGGTGTCCGTCTGT
GACCACTGCAAGGGCAAGATGCAGCTGGTGGCCGAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               20-756, gnl|bosTau2|chr21 (19301893-19302635)
               

               
               20-756, gnl|Hg17|chr15 (79081066-79081814)
               

               
               20-756, gnl|Mm7|chr7 (79805325-79804655)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-756, gnl|bosTau2|chr21 (19301893-19302635)
               

               
               20-756, gnl|Hg17|chr15 (79081066-79081814)
               

               
               20-756, gnl|Mm7|chr7 (79805325-79804655)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.267344)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	20-756, gnl\|bosTau2\|chr21 (19301893-19302635)
	20-756, gnl\|Hg17\|chr15 (79081066-79081814)
	20-756, gnl\|Mm7\|chr7 (79805325-79804655)