Ss1.1-rplac_8180.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTCATCTCTGACTCCGAGGCTGACGTGCGGGAGGAGGATTCCTACCTCTTTGATCTGG ACAACAAGGACGGAGAGCTCTACTGCATCGACGCGCGCTTCTACGGGAACGTCAGCCGCT TCATAAACCACCACTGCGAGCCCAACCTGGTGCCGGTGCGCGTCTTCATGTCGCACCAGG ACCTGCGCTTCCCCAGGATCGCCTTCTTCAGCACGCGCCTCATCGAGGCCGGCGAGCAGC TGGGGTTCGACTACGGGGAGCGCTTCTGGGACATCAAGGGCAAGCTGTTCAGCTGCCGCT GCGGCTCCCCCAAGTGCCGGCACTCCAGCTCCGCCCTGGCGCAGCGGCAGGCCAGCGCCG CGCAGGGCGCCCCCGAGGACCGGCTGCCCGACACCAGCTCCGCCGCCGCCGACCCGCTAT GAGAGCTGCGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTCATCTCTGACTCCGAGGCTGACGTGCGGGAGGAGGATTCCTACCTCTTTGATCTGG ACAACAAGGACGGAGAGCTCTACTGCATCGACGCGCGCTTCTACGGGAACGTCAGCCGCT TCATAAACCACCACTGCGAGCCCAACCTGGTGCCGGTGCGCGTCTTCATGTCGCACCAGG ACCTGCGCTTCCCCAGGATCGCCTTCTTCAGCACGCGCCTCATCGAGGCCGGCGAGCAGC TGGGGTTCGACTACGGGGAGCGCTTCTGGGACATCAAGGGCAAGCTGTTCAGCTGCCGCT GCGGCTCCCCCAAGTGCCGGCACTCCAGCTCCGCCCTGGCGCAGCGGCAGGCCAGCGCCG CGCAGGGCGCCCCCGAGGACCGGCTGCCCGACACCAGCTCCGCCGCCGCCGACCCGCTAT GAGAGCTGCGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 67-246, gnl|bosTau2|chr23 (23481401-23481222) | |
| 67-246, gnl|canFam2|chr12 (4344649-4344833) | |
| 67-246, gnl|canFam2|chr9 (51359348-51359194) | |
| 67-246, gnl|danRer3|chr25 (27428410-27428246) | |
| 67-246, gnl|danRer3|chrNA (157061016-157061202) | |
| 67-246, gnl|dasNov1|scaffold_126617 (779-617) | |
| 67-246, gnl|dasNov1|scaffold_202062 (1376-1192) | |
| 67-246, gnl|echTel1|scaffold_275394 (11587-11774) | |
| 67-246, gnl|echTel1|scaffold_275394 (11811-11644) | |
| 67-246, gnl|fr1|chrUn (203994939-203994756) | |
| 67-246, gnl|fr1|chrUn (129586586-129586447) | |
| 67-246, gnl|galGal2|chr17 (8805303-8805494) | |
| 67-246, gnl|galGal2|chr17 (8805508-8805364) | |
| 67-246, gnl|hg17|chr6 (31956418-31956609) | |
| 67-246, gnl|Hg17|chr6 (31956606-31956427) | |
| 67-246, gnl|hg17|chr9 (138004599-138004765) | |
| 67-246, gnl|mm7|chr17 (33009912-33009721) | |
| 67-246, gnl|Mm7|chr17 (33009722-33009901) | |
| 67-246, gnl|mm7|chr2 (24799804-24799642) | |
| 67-246, gnl|monDom2|scaffold_1 (186137745-186137601) | |
| 67-246, gnl|monDom2|scaffold_42 (17477789-17477603) | |
| 67-246, gnl|oryCun1|scaffold_180602 (60279-60432) | |
| 67-246, gnl|oryCun1|scaffold_200741 (44025-43838) | |
| 67-246, gnl|panTro1|chr11 (122686230-122686398) | |
| 67-246, gnl|panTro1|chr5 (32361473-32361664) | |
| 67-246, gnl|rheMac2|chr15 (387129-386961) | |
| 67-246, gnl|rheMac2|chr4 (31531611-31531802) | |
| 67-246, gnl|rn3|chr20 (4022900-4023084) | |
| 67-246, gnl|rn3|chr3 (3075770-3075598) | |
| 67-246, gnl|tetNig1|chrUn_random (96820767-96820952) | |
| 67-246, gnl|tetNig1|chrUn_random (12500103-12500219) | |
| 67-246, gnl|xenTro1|scaffold_1207 (95238-95425) | |
| 67-246, gnl|xenTro1|scaffold_1207 (95433-95295) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 67-246, gnl|bosTau2|chr23 (23481401-23481222) | |
| 67-246, gnl|canFam2|chr12 (4344649-4344833) | |
| 67-246, gnl|canFam2|chr9 (51359348-51359194) | |
| 67-246, gnl|danRer3|chr25 (27428410-27428246) | |
| 67-246, gnl|danRer3|chrNA (157061016-157061202) | |
| 67-246, gnl|dasNov1|scaffold_126617 (779-617) | |
| 67-246, gnl|dasNov1|scaffold_202062 (1376-1192) | |
| 67-246, gnl|echTel1|scaffold_275394 (11587-11774) | |
| 67-246, gnl|echTel1|scaffold_275394 (11811-11644) | |
| 67-246, gnl|fr1|chrUn (203994939-203994756) | |
| 67-246, gnl|fr1|chrUn (129586586-129586447) | |
| 67-246, gnl|galGal2|chr17 (8805303-8805494) | |
| 67-246, gnl|galGal2|chr17 (8805508-8805364) | |
| 67-246, gnl|hg17|chr6 (31956418-31956609) | |
| 67-246, gnl|Hg17|chr6 (31956606-31956427) | |
| 67-246, gnl|hg17|chr9 (138004599-138004765) | |
| 67-246, gnl|mm7|chr17 (33009912-33009721) | |
| 67-246, gnl|Mm7|chr17 (33009722-33009901) | |
| 67-246, gnl|mm7|chr2 (24799804-24799642) | |
| 67-246, gnl|monDom2|scaffold_1 (186137745-186137601) | |
| 67-246, gnl|monDom2|scaffold_42 (17477789-17477603) | |
| 67-246, gnl|oryCun1|scaffold_180602 (60279-60432) | |
| 67-246, gnl|oryCun1|scaffold_200741 (44025-43838) | |
| 67-246, gnl|panTro1|chr11 (122686230-122686398) | |
| 67-246, gnl|panTro1|chr5 (32361473-32361664) | |
| 67-246, gnl|rheMac2|chr15 (387129-386961) | |
| 67-246, gnl|rheMac2|chr4 (31531611-31531802) | |
| 67-246, gnl|rn3|chr20 (4022900-4023084) | |
| 67-246, gnl|rn3|chr3 (3075770-3075598) | |
| 67-246, gnl|tetNig1|chrUn_random (96820767-96820952) | |
| 67-246, gnl|tetNig1|chrUn_random (12500103-12500219) | |
| 67-246, gnl|xenTro1|scaffold_1207 (95238-95425) | |
| 67-246, gnl|xenTro1|scaffold_1207 (95433-95295) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| pla (0.133672) |