Ss1.1-rplac_8213.5
|
TGAGCCCAGGCTGCTATGACACATACAACGCGGACATCGACTGCCAGTGGATTGACATAA
CCGACGTGCAGCCTGGGAACTACATCCTCAAGGTGCACGTGAACCCAAAGTACATTGTTT
TGGAGTCTGACTTCACCAACAATGTGGTGAGATGCAACATCCACTATACAGGTCGCTACG
TTTCTGCAACAAACTGCAAGATTGTCCAATCCTGATTGGGGAGAGGATGTGCAGACGGCC
AACCTCCCCACCTCCCAAAGCAGGCCCAGCTCCCCGGCAGCCTCCTGCCAGGACAAGCCC
GGCCCAATGGGTCCAGCCCCCCACCCACAGGGGGGGCCACTGGACGCCGGGAGCACCCTC
CCCTGCCCGCCTCAGGGAGCGATCGTGGACTGAAACCACAGGGATTCCGGATGCCAGGCC
TAGTTGTGTACTTAACTTTCCCCTACAACGTTATTTTGTCGGTTGTTGTTTTTTTATTTT
TTATATTTTGGCCGTACCGCAGCGCAAGATTGCCCAGGCCGGGGCTGAATAAAACAAGGT
TTTTCTAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGAGCCCAGGCTGCTATGACACATACAACGCGGACATCGACTGCCAGTGGATTGACATAA
CCGACGTGCAGCCTGGGAACTACATCCTCAAGGTGCACGTGAACCCAAAGTACATTGTTT
TGGAGTCTGACTTCACCAACAATGTGGTGAGATGCAACATCCACTATACAGGTCGCTACG
TTTCTGCAACAAACTGCAAGATTGTCCAATCCTGATTGGGGAGAGGATGTGCAGACGGCC
AACCTCCCCACCTCCCAAAGCAGGCCCAGCTCCCCGGCAGCCTCCTGCCAGGACAAGCCC
GGCCCAATGGGTCCAGCCCCCCACCCACAGGGGGGGCCACTGGACGCCGGGAGCACCCTC
CCCTGCCCGCCTCAGGGAGCGATCGTGGACTGAAACCACAGGGATTCCGGATGCCAGGCC
TAGTTGTGTACTTAACTTTCCCCTACAACGTTATTTTGTCGGTTGTTGTTTTTTTATTTT
TTATATTTTGGCCGTACCGCAGCGCAAGATTGCCCAGGCCGGGGCTGAATAAAACAAGGT
TTTTCTAAAAAAAAAAAAAAAAAA
|
|
gi|55642913|ref|XP_510663.1| |
Protein identifier
|
gi|55642913|ref|XP_510663.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
80-208, gnl|bosTau2|chr21 (23934513-23934641) |
|
80-208, gnl|Hg17|chr15 (72028840-72028968) |
|
80-208, gnl|Mm7|chr9 (58319378-58319250) |
| |
|
209-446, gnl|bosTau2|chr21 (23936701-23936940) |
|
209-446, gnl|canFam2|chr30 (40202428-40202795) |
|
209-446, gnl|dasNov1|scaffold_16587 (6719-7115) |
|
209-446, gnl|echTel1|scaffold_140118 (447-809) |
|
209-446, gnl|hg17|chr15 (72031080-72031407) |
|
209-446, gnl|Hg17|chr15 (72031225-72031431) |
|
209-446, gnl|loxAfr1|scaffold_39348 (10138-9735) |
|
209-446, gnl|mm7|chr9 (58317515-58317224) |
|
209-446, gnl|Mm7|chr9 (58317412-58317198) |
|
209-446, gnl|monDom2|scaffold_41 (4379045-4378729) |
|
209-446, gnl|panTro1|chr16_random (21163767-21164097) |
|
209-446, gnl|rheMac2|chr7 (52633778-52634103) |
|
209-446, gnl|rn3|chr8 (62102525-62102234) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
80-208, gnl|bosTau2|chr21 (23934513-23934641) |
|
80-208, gnl|Hg17|chr15 (72028840-72028968) |
|
80-208, gnl|Mm7|chr9 (58319378-58319250) |
| |
|
209-446, gnl|bosTau2|chr21 (23936701-23936940) |
|
209-446, gnl|canFam2|chr30 (40202428-40202795) |
|
209-446, gnl|dasNov1|scaffold_16587 (6719-7115) |
|
209-446, gnl|echTel1|scaffold_140118 (447-809) |
|
209-446, gnl|hg17|chr15 (72031080-72031407) |
|
209-446, gnl|Hg17|chr15 (72031225-72031431) |
|
209-446, gnl|loxAfr1|scaffold_39348 (10138-9735) |
|
209-446, gnl|mm7|chr9 (58317515-58317224) |
|
209-446, gnl|Mm7|chr9 (58317412-58317198) |
|
209-446, gnl|monDom2|scaffold_41 (4379045-4378729) |
|
209-446, gnl|panTro1|chr16_random (21163767-21164097) |
|
209-446, gnl|rheMac2|chr7 (52633778-52634103) |
|
209-446, gnl|rn3|chr8 (62102525-62102234) |
|
cga (0.279096) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
pla (0.133672) |
|
eru (0.120048) |
|
nbm (0.0993246) |
|
cga (0.279096) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
pla (0.133672) |
|
eru (0.120048) |
|
nbm (0.0993246) |
