Non-Coding RNA Search

Ss1.1-rplac_8584.5

Sequence:


               
               ACAGCTCTAAGCAAAAGAGCTGGGGTCCGCAGCTCCCTTGCCCGCCCCGCCCCCCGGCAC
CAGCCTCTTCGGGCCAACGAGAAATCCGGACTGAGAAAGCCCCAGCCGCAGCCGCTGCCA
CCGCCGCGCGAAAGCGGCGCCTGGGAGGATGCTGCTACCCGACTCTCCCTACGCCGAGCG
GCTGCAACGCGCTCGGGCCAGCCTCTGCACGGCTCCTGCCAGCAGGCGCCGGGTTGGTGC
GCGCCACCGTCTATCCTTGGGACTCCTCCCCTTTCACCGCGCTGCGCTCCTCCTCCGCGC
GTCCCGCGCCCGCCCCCGACTCAGCGCCCGGCTCCCGCCGCCGACGCCTTGGGGGTTGGA
GATGCGGGGACCAATTTATAGCGGCGTCGCTCCGGCCGCCATCCGCGCGGTGGAGGCCGT
AGCAGTCCGTGTGCTGAGCGCCAGGGCGCTGACTCGGGGGTTAAGAGCGCTCCGGCGCCC
CGACCTCTGAGAAACTTGGATTCTGCTCGCCGCTGCCGGGCTCAATCGTCCGTTTTTGCT
CTCGGAAAGAGTTGGTGATAAAGTTTGGACAAATCCCGCAGCGGCCTCCCACGCCGCTCT
TCCCCCGGGTCGGCACGGCTGGGCCCCTCCGGGAACTGAGGACGCACCCGCGCCCCGGAG
AGCTCTGGTAACGCCGAGCGTCGCTCTCAGGTTCCCACTCCCCGCTCGTCAGTTCCAACT
AGCCTGAGGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAGCTCTAAGCAAAAGAGCTGGGGTCCGCAGCTCCCTTGCCCGCCCCGCCCCCCGGCAC
CAGCCTCTTCGGGCCAACGAGAAATCCGGACTGAGAAAGCCCCAGCCGCAGCCGCTGCCA
CCGCCGCGCGAAAGCGGCGCCTGGGAGGATGCTGCTACCCGACTCTCCCTACGCCGAGCG
GCTGCAACGCGCTCGGGCCAGCCTCTGCACGGCTCCTGCCAGCAGGCGCCGGGTTGGTGC
GCGCCACCGTCTATCCTTGGGACTCCTCCCCTTTCACCGCGCTGCGCTCCTCCTCCGCGC
GTCCCGCGCCCGCCCCCGACTCAGCGCCCGGCTCCCGCCGCCGACGCCTTGGGGGTTGGA
GATGCGGGGACCAATTTATAGCGGCGTCGCTCCGGCCGCCATCCGCGCGGTGGAGGCCGT
AGCAGTCCGTGTGCTGAGCGCCAGGGCGCTGACTCGGGGGTTAAGAGCGCTCCGGCGCCC
CGACCTCTGAGAAACTTGGATTCTGCTCGCCGCTGCCGGGCTCAATCGTCCGTTTTTGCT
CTCGGAAAGAGTTGGTGATAAAGTTTGGACAAATCCCGCAGCGGCCTCCCACGCCGCTCT
TCCCCCGGGTCGGCACGGCTGGGCCCCTCCGGGAACTGAGGACGCACCCGCGCCCCGGAG
AGCTCTGGTAACGCCGAGCGTCGCTCTCAGGTTCCCACTCCCCGCTCGTCAGTTCCAACT
AGCCTGAGGCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-321, gnl|bosTau2|chr1 (78741046-78740729)
               

               
               1-321, gnl|Hg17|chr3 (144321520-144321170)
               

               
               1-321, gnl|Mm7|chr9 (95052963-95053281)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-321, gnl|bosTau2|chr1 (78741046-78740729)
               

               
               1-321, gnl|Hg17|chr3 (144321520-144321170)
               

               
               1-321, gnl|Mm7|chr9 (95052963-95053281)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               eep (0.122564)

	1-321, gnl\|bosTau2\|chr1 (78741046-78740729)
	1-321, gnl\|Hg17\|chr3 (144321520-144321170)
	1-321, gnl\|Mm7\|chr9 (95052963-95053281)