Non-Coding RNA Search

Ss1.1-rplac_8628.5

Sequence:


               
               AGTCTGGAGATGTCTGCCAACAACAACAACGTTCAGGGGGAGCAGGATGGTGTGGGTTGA
CAGCTCACGGATGAAGCCCCTGACACACTTTTGGCTGTTTTGCAAAGCTTGTGGAAAACT
TTTTGGCAGTGTGTACTATGCTCTATAGCTATATATAGTATCTATAAGTGTAGGTGTTAA
GGATAAGTAAATCTCAAATTTATTCTATAGTATCAGAATTTTATTAAGTTTCCTTTCACT
CATTTGATTTATTTCATTGCTGTTGATCAACTTTATTTTAATTAAATACTTTAATTTTTT
TTTGGTATTTTCCAACAAAATGCCTCTATTCATAAGAAAGGGAAAAGGAAAGGAACTGAA
TCTCTAAAGAAGGTGGAAAGGGAGCAAAATAAAAACATAATTTAAATAAATCAAAACATC
AAAATTATTACGCAAAGTCAATAGTCTATCTACCTTTTGAAACAAATTGGCAAAATCGAT
TGACTTTTGGCCCAAATTTTCAGTGTGAATTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCTGGAGATGTCTGCCAACAACAACAACGTTCAGGGGGAGCAGGATGGTGTGGGTTGA
CAGCTCACGGATGAAGCCCCTGACACACTTTTGGCTGTTTTGCAAAGCTTGTGGAAAACT
TTTTGGCAGTGTGTACTATGCTCTATAGCTATATATAGTATCTATAAGTGTAGGTGTTAA
GGATAAGTAAATCTCAAATTTATTCTATAGTATCAGAATTTTATTAAGTTTCCTTTCACT
CATTTGATTTATTTCATTGCTGTTGATCAACTTTATTTTAATTAAATACTTTAATTTTTT
TTTGGTATTTTCCAACAAAATGCCTCTATTCATAAGAAAGGGAAAAGGAAAGGAACTGAA
TCTCTAAAGAAGGTGGAAAGGGAGCAAAATAAAAACATAATTTAAATAAATCAAAACATC
AAAATTATTACGCAAAGTCAATAGTCTATCTACCTTTTGAAACAAATTGGCAAAATCGAT
TGACTTTTGGCCCAAATTTTCAGTGTGAATTAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               23-528, gnl|bosTau2|chr4 (2046389-2046851)
               

               
               23-528, gnl|Hg17|chr7 (93942084-93942573)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-528, gnl|bosTau2|chr4 (2046389-2046851)
               

               
               23-528, gnl|Hg17|chr7 (93942084-93942573)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               fli (0.202881)
               

               
               eye (0.170503)
               

               
               hyp (0.142837)
               

               
               pla (0.133672)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               eye (0.170503)
               

               
               hyp (0.142837)
               

               
               pla (0.133672)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)

	23-528, gnl\|bosTau2\|chr4 (2046389-2046851)
	23-528, gnl\|Hg17\|chr7 (93942084-93942573)

	fli (0.202881)
	eye (0.170503)
	hyp (0.142837)
	pla (0.133672)
	eep (0.122564)
	pgl (0.118483)