Non-Coding RNA Search

Ss1.1-rplac_8867.5

Sequence:


               
               TCGTCGACCCCGCGTCCGGGGCCAGCTCCCCTCACCCGGCAAGCCTTCGAAATGGCGTTA
GAATGGGTCGGAGAGGCCTCGGCTCTGTTTTTGTCTGGGCCTCGGGAAATGGTGGGAGGA
GCAAAGACCACTGCTCCTGTGATGGCTACACCAATAGCATCTACACCATCTCCATCAGCA
GCACAGCCGAAAGCGGGAAGAAGCCTTGGTACCTGGAAGAGTGTTCGTCTACACTTGCCA
CGACCTACAGCAGCGGAGAGTCCTATGATAAGAAAATAATTACTACGGATCTGAGGCAGC
GTTGCACGGATAACCACACTGGGACTTCAGCCTCAGCCCCCATGGCTGCGGGCATCATTG
CACTGGCCCTGGAAGCCAATCCGTTTCTGACCTGGAGAGACGTGCAGCATGTTATTGTAA
GGACTTCCCGTGCAGGACATTTGAACGCTAATGACTGGAAAACCAATGCTGCTGGTTTTA
TTGTGTTCTTTAATATCCAGTGATGACTGATGGATGCAGAAGCCATGGTGATGGAGGCGG
AGAAGTGGACCACTGTTCCCCAGCAGCACGTGTGTGTGGAGAGCACAGATCGACAAATCA
AGACCATTCGCCCCAACAGTGCAGTGCGCTCCATCTACAAAGCTTCGGGGTGCTCTGATA
ACCCCAACCACCACGTCAACTACCTGGAACATGTAGTTGTGCGCATAACCATCACCCACC
CCCGGAGGGGAGACCTGGCCATCTACCTGACCTCGCCCTCAGGAACCAGGTCCCAGCTTT
TAGCCAACAGGCTTTTTGATCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGTCGACCCCGCGTCCGGGGCCAGCTCCCCTCACCCGGCAAGCCTTCGAAATGGCGTTA
GAATGGGTCGGAGAGGCCTCGGCTCTGTTTTTGTCTGGGCCTCGGGAAATGGTGGGAGGA
GCAAAGACCACTGCTCCTGTGATGGCTACACCAATAGCATCTACACCATCTCCATCAGCA
GCACAGCCGAAAGCGGGAAGAAGCCTTGGTACCTGGAAGAGTGTTCGTCTACACTTGCCA
CGACCTACAGCAGCGGAGAGTCCTATGATAAGAAAATAATTACTACGGATCTGAGGCAGC
GTTGCACGGATAACCACACTGGGACTTCAGCCTCAGCCCCCATGGCTGCGGGCATCATTG
CACTGGCCCTGGAAGCCAATCCGTTTCTGACCTGGAGAGACGTGCAGCATGTTATTGTAA
GGACTTCCCGTGCAGGACATTTGAACGCTAATGACTGGAAAACCAATGCTGCTGGTTTTA
TTGTGTTCTTTAATATCCAGTGATGACTGATGGATGCAGAAGCCATGGTGATGGAGGCGG
AGAAGTGGACCACTGTTCCCCAGCAGCACGTGTGTGTGGAGAGCACAGATCGACAAATCA
AGACCATTCGCCCCAACAGTGCAGTGCGCTCCATCTACAAAGCTTCGGGGTGCTCTGATA
ACCCCAACCACCACGTCAACTACCTGGAACATGTAGTTGTGCGCATAACCATCACCCACC
CCCGGAGGGGAGACCTGGCCATCTACCTGACCTCGCCCTCAGGAACCAGGTCCCAGCTTT
TAGCCAACAGGCTTTTTGATCATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               65-289, gnl|bosTau2|chr21 (192230-192006)
               

               
               65-289, gnl|Hg17|chr15 (99751153-99750932)
               

               
               65-289, gnl|Mm7|chr7 (61817063-61817284)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-289, gnl|bosTau2|chr21 (192230-192006)
               

               
               65-289, gnl|Hg17|chr15 (99751153-99750932)
               

               
               65-289, gnl|Mm7|chr7 (61817063-61817284)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	65-289, gnl\|bosTau2\|chr21 (192230-192006)
	65-289, gnl\|Hg17\|chr15 (99751153-99750932)
	65-289, gnl\|Mm7\|chr7 (61817063-61817284)