Ss1.1-rplac_9028.5
|
ACAGTTGAAGCCGCTTCGGAGGGAGAAGGCGTTGTTTGTAAGCTTTCCCATCAGATCAGA
TCGGGGGCCCAGAAAGGTCCAGTCCTCCCTGCGTGGGTTCCCTCCGGCCACCACGGCCCT
GCAGCTGCCCCTCTCCCCCAGGGATGACTCGGCACGGCAAGAACTGCACGGCGGGGGCCG
TCTACACCTACCACGAGAAGAAGAAGGACACAGCGGCCTCAGGCTACGGGACCCAGAACA
TTCGACTGAGCCGGGATGCAGTCAAGGACTTTGACTGCTGCTGCCTCTCTCTGCAGCCCT
GCCACGACCCCGTCGTCACCCCCGATGGCTACCTTTATGAGCGGGAGGCGATCCTGGAGT
ACATTTTGCACCAGAAGAAGGAGATCGCCCGACAGATGAAGGCCTACGAGAAGCAGCGGG
GCGCCCGGCGAGAGGAGCAGAAGGAGCTGCAGCGCGCAGCGGCGCAGGATCAGGTTCGGG
GCTTCCTGGAGAAGGAGGCGGCCATCGTGAGCCGGCCCCTCAACCCCTTCACGCCCAAGG
CTGCGTCTGGGGACAGCCCAGATGACGCCCAACCCGGGCCCAGCGCGGGCCCCGCAGGCA
AGGACAAGGACAAAGCGCTGCCCAGCTTCTGGATCCCGTCGCTGACCCCCGAGGCCAAGG
CCACAAAGCTGGAGAAGCCGTCACGCGTCGTGACCTGCCCCATGTCTGGGAAGCCCCTGC
GCATGTCGGACCTGACCCCCGTGCGCTTCACGCCGCTCGATAGCTCCGTGGACCGAGTGG
GGCTCATCACGCGCAGCGAGCGCTACGTGTGCGCCGTGACCCGCGACAGCCTGAGCAACG
CCACGCCGTGCGCTGTGCTCCGGCCCTCCGGGGCCGTGGTCACCCTGGAGTGCGTGGAGA
AGCTGATTCGCAAGGACATGGTGGACCCGGTGAACGGGGAGAAGCTCACGGACCGCGACA
TCATCGTGCTGCAGCGGGGCGGCACCGGCTTCGCGGGCTCGGGCGTGAAGCTGCAGGCGG
AGAAGTCCAGGCCCGTGATGCAGGCCTGATGCGCCGCCCGCCGGGAACCAAATAAACGGG
CTTGGACGCAACTGGCCTCGGGGCGCTGTCATTCACTGCGCTGGAACCTGGGGACCGCGG
GCGGGGAAGCCAGGCCGCTGGGGTGGCTCCACTTTGAAAACATGGGCTAAGAATAGAATA
TTTGCTGTGGGCTCACGTGAAGAGTAAAATCTAAAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACAGTTGAAGCCGCTTCGGAGGGAGAAGGCGTTGTTTGTAAGCTTTCCCATCAGATCAGA
TCGGGGGCCCAGAAAGGTCCAGTCCTCCCTGCGTGGGTTCCCTCCGGCCACCACGGCCCT
GCAGCTGCCCCTCTCCCCCAGGGATGACTCGGCACGGCAAGAACTGCACGGCGGGGGCCG
TCTACACCTACCACGAGAAGAAGAAGGACACAGCGGCCTCAGGCTACGGGACCCAGAACA
TTCGACTGAGCCGGGATGCAGTCAAGGACTTTGACTGCTGCTGCCTCTCTCTGCAGCCCT
GCCACGACCCCGTCGTCACCCCCGATGGCTACCTTTATGAGCGGGAGGCGATCCTGGAGT
ACATTTTGCACCAGAAGAAGGAGATCGCCCGACAGATGAAGGCCTACGAGAAGCAGCGGG
GCGCCCGGCGAGAGGAGCAGAAGGAGCTGCAGCGCGCAGCGGCGCAGGATCAGGTTCGGG
GCTTCCTGGAGAAGGAGGCGGCCATCGTGAGCCGGCCCCTCAACCCCTTCACGCCCAAGG
CTGCGTCTGGGGACAGCCCAGATGACGCCCAACCCGGGCCCAGCGCGGGCCCCGCAGGCA
AGGACAAGGACAAAGCGCTGCCCAGCTTCTGGATCCCGTCGCTGACCCCCGAGGCCAAGG
CCACAAAGCTGGAGAAGCCGTCACGCGTCGTGACCTGCCCCATGTCTGGGAAGCCCCTGC
GCATGTCGGACCTGACCCCCGTGCGCTTCACGCCGCTCGATAGCTCCGTGGACCGAGTGG
GGCTCATCACGCGCAGCGAGCGCTACGTGTGCGCCGTGACCCGCGACAGCCTGAGCAACG
CCACGCCGTGCGCTGTGCTCCGGCCCTCCGGGGCCGTGGTCACCCTGGAGTGCGTGGAGA
AGCTGATTCGCAAGGACATGGTGGACCCGGTGAACGGGGAGAAGCTCACGGACCGCGACA
TCATCGTGCTGCAGCGGGGCGGCACCGGCTTCGCGGGCTCGGGCGTGAAGCTGCAGGCGG
AGAAGTCCAGGCCCGTGATGCAGGCCTGATGCGCCGCCCGCCGGGAACCAAATAAACGGG
CTTGGACGCAACTGGCCTCGGGGCGCTGTCATTCACTGCGCTGGAACCTGGGGACCGCGG
GCGGGGAAGCCAGGCCGCTGGGGTGGCTCCACTTTGAAAACATGGGCTAAGAATAGAATA
TTTGCTGTGGGCTCACGTGAAGAGTAAAATCTAAAT
|
|
gi|61839743|ref|XP_588530.1| |
Protein identifier
|
gi|61839743|ref|XP_588530.1| |
|
41-213, gnl|bosTau2|chr18 (48679920-48679746) |
|
41-213, gnl|Hg17|chr19 (54755866-54755691) |
| |
|
397-565, gnl|bosTau2|chr18 (48677739-48677568) |
|
397-565, gnl|Hg17|chr19 (54752322-54752155) |
|
397-565, gnl|Mm7|chr7 (41251792-41251940) |
| |
|
680-868, gnl|bosTau2|chr18 (48676982-48676794) |
|
680-868, gnl|Hg17|chr19 (54751806-54751618) |
|
680-868, gnl|Mm7|chr7 (41252279-41252467) |
| |
|
977-1236, gnl|bosTau2|chr18 (48676419-48676176) |
|
977-1236, gnl|Hg17|chr19 (54750892-54750626) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
41-213, gnl|bosTau2|chr18 (48679920-48679746) |
|
41-213, gnl|Hg17|chr19 (54755866-54755691) |
| |
|
397-565, gnl|bosTau2|chr18 (48677739-48677568) |
|
397-565, gnl|Hg17|chr19 (54752322-54752155) |
|
397-565, gnl|Mm7|chr7 (41251792-41251940) |
| |
|
680-868, gnl|bosTau2|chr18 (48676982-48676794) |
|
680-868, gnl|Hg17|chr19 (54751806-54751618) |
|
680-868, gnl|Mm7|chr7 (41252279-41252467) |
| |
|
977-1236, gnl|bosTau2|chr18 (48676419-48676176) |
|
977-1236, gnl|Hg17|chr19 (54750892-54750626) |
|
amn (0.417711) |
|
ton (0.351) |
|
pla (0.267344) |
|
cty (0.20816) |
|
ill (0.175593) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
nco (0.161734) |
|
cli (0.152812) |
|
cag (0.151194) |
|
nca (0.136874) |
|
cbr (0.127975) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
jej (0.0989218) |
|
eje (0.0988338) |
|
amn (0.417711) |
|
ton (0.351) |
|
pla (0.267344) |
|
cty (0.20816) |
|
ill (0.175593) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
nco (0.161734) |
|
cli (0.152812) |
|
cag (0.151194) |
|
nca (0.136874) |
|
cbr (0.127975) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
jej (0.0989218) |
|
eje (0.0988338) |
