Non-Coding RNA Search

Ss1.1-rplac_9054.5

Sequence:


               
               GCCCCAGGATCTGAGTCTTACCCCTGGGTATGCTCTGACCCAGCCCCACATTAAAAAAAA
AAAAAAAAAAAAAAATCCAGAAAGCCTCAGTAGTACTGTGTGCCTAAGTTCTTGTCCCCA
GCTACGTTTTGATCAAGGAATCTGCAGCTTCAAAAGAAGCAGGAAAGAGCCCTTTGTGGC
TTGGACTGTGGGGTGCTAGTGTGGGTTTGGAGTCTCGCAGTGCAGTACACAGAGCCTGGC
TGAAGTTTCTTTCAGGGCAGGTAGCGTCCCACCAAGATAACATCTGCCCCAGCCACAGAC
CTTGGCCATGACTGCCTTTAACCTGGAGCTAAACCCTGTCGCAGACACAGGTTGTTAAAA
AGCCTCATAGTGGTTCACCTTGCTGTGAGCACAGCAGAAAGGATCAGGGCAGCCTGCCTC
TTCATGGAAGGCAGCTCAGGCTCTTGGGAATGGGACAGTGGTTGGAGATAGGGTGGTCGT
TGTGGAAGCCCTGATCCCATCTAATAAAAAACACGCACCGCCAGAGCCACCTTTCTACCC
ATTAGGAAATCTGCATCAGCTACTTGGACTGCTGTCAGCGGGAGCGCAGCCGCCATAGCC
GCCACAAGATCCTCAGGTACCTGCTGGGGATGGGGCGGGCATCTGGGCTCTGGGGTCCTC
CATCCTGGGGGCTGCCTGCCTTTGGATGCCCACCTTCATCCCCCCACCCTCTGCAGGGAG
AACTACCTGTTCGTCTGTTCCTGCCCCAAATGCTTGGCAGAGGCTGATGAGCCCAACATG
ACCTCTGNAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCCAGGATCTGAGTCTTACCCCTGGGTATGCTCTGACCCAGCCCCACATTAAAAAAAA
AAAAAAAAAAAAAAATCCAGAAAGCCTCAGTAGTACTGTGTGCCTAAGTTCTTGTCCCCA
GCTACGTTTTGATCAAGGAATCTGCAGCTTCAAAAGAAGCAGGAAAGAGCCCTTTGTGGC
TTGGACTGTGGGGTGCTAGTGTGGGTTTGGAGTCTCGCAGTGCAGTACACAGAGCCTGGC
TGAAGTTTCTTTCAGGGCAGGTAGCGTCCCACCAAGATAACATCTGCCCCAGCCACAGAC
CTTGGCCATGACTGCCTTTAACCTGGAGCTAAACCCTGTCGCAGACACAGGTTGTTAAAA
AGCCTCATAGTGGTTCACCTTGCTGTGAGCACAGCAGAAAGGATCAGGGCAGCCTGCCTC
TTCATGGAAGGCAGCTCAGGCTCTTGGGAATGGGACAGTGGTTGGAGATAGGGTGGTCGT
TGTGGAAGCCCTGATCCCATCTAATAAAAAACACGCACCGCCAGAGCCACCTTTCTACCC
ATTAGGAAATCTGCATCAGCTACTTGGACTGCTGTCAGCGGGAGCGCAGCCGCCATAGCC
GCCACAAGATCCTCAGGTACCTGCTGGGGATGGGGCGGGCATCTGGGCTCTGGGGTCCTC
CATCCTGGGGGCTGCCTGCCTTTGGATGCCCACCTTCATCCCCCCACCCTCTGCAGGGAG
AACTACCTGTTCGTCTGTTCCTGCCCCAAATGCTTGGCAGAGGCTGATGAGCCCAACATG
ACCTCTGNAGGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-792, gnl|bosTau2|chr11 (8917050-8917829)
               

               
               5-792, gnl|Hg17|chr2 (73363871-73364653)
               

               
               5-792, gnl|Mm7|chr6 (85474105-85474788)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-792, gnl|bosTau2|chr11 (8917050-8917829)
               

               
               5-792, gnl|Hg17|chr2 (73363871-73364653)
               

               
               5-792, gnl|Mm7|chr6 (85474105-85474788)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	5-792, gnl\|bosTau2\|chr11 (8917050-8917829)
	5-792, gnl\|Hg17\|chr2 (73363871-73364653)
	5-792, gnl\|Mm7\|chr6 (85474105-85474788)