Ss1.1-rplac_9077.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGCCAGCGCACCTTCTCGGCTCGGGACCGAGCCTATGTGGCATCTCTGCTTACGGTGGC GCTGCATGGGAAGCTTGAGTACTTCACCGACATCCTGCGCACCCTGCTCAGTGACCTGGT GGCCCAGTATGTGGCCAAGAACCCCAAGCTAATGCTGCGCAGGACAGAGACTGTGGTGGA GAAGCTGCTCACCAACTGGATGTCCATCTGCCTCTACACTTTCGTGAGGGACTCAGTAGG GGAACCTCTGTACATGCTTTTCCGTGGAATTAAGCATCAAGTGGACAAGGGGCCGGTGGA CAGCGTGACTGGAAAAGCCAAATATACCCTGAATGACAACCGCTTGCTCCGAGAGGATGT GGAGTACCGTCCCCTGACCTTGAACGTGATGTTGGCCATGGGCCCTGGAGCAGGAGAAGC CCAGGGTGTGCCTGTGAAGGTTCTGGACTGTGACACTATCTCTCAGGCCAAGGAGAAGAT GCTGGACCAGCTTTATAAAGGAGTACCTCTTGCCCAGAGGCCAGACCCTCGCACCCTAGA TGCAGAATGGAGATCTGGGGTGGCCGGGCATCTCATTCTTTCAGATGAGGACGTGACTTC TGAGGTCCAGGGTCTGTGGAGGCGCTTGAACACCCTGCAGCATTACAAGGTCCCAGACGG AGCAACTGTGGCCCTCGTCCCCTGCCTCACCAAGCATGCTCTCCGGGAAAGCCAGGATTA TGTCCCTGGAGAGAGGACCCCAATGCTGGATGATGTGGACGATGGGGGCATCCGGCCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGCCAGCGCACCTTCTCGGCTCGGGACCGAGCCTATGTGGCATCTCTGCTTACGGTGGC GCTGCATGGGAAGCTTGAGTACTTCACCGACATCCTGCGCACCCTGCTCAGTGACCTGGT GGCCCAGTATGTGGCCAAGAACCCCAAGCTAATGCTGCGCAGGACAGAGACTGTGGTGGA GAAGCTGCTCACCAACTGGATGTCCATCTGCCTCTACACTTTCGTGAGGGACTCAGTAGG GGAACCTCTGTACATGCTTTTCCGTGGAATTAAGCATCAAGTGGACAAGGGGCCGGTGGA CAGCGTGACTGGAAAAGCCAAATATACCCTGAATGACAACCGCTTGCTCCGAGAGGATGT GGAGTACCGTCCCCTGACCTTGAACGTGATGTTGGCCATGGGCCCTGGAGCAGGAGAAGC CCAGGGTGTGCCTGTGAAGGTTCTGGACTGTGACACTATCTCTCAGGCCAAGGAGAAGAT GCTGGACCAGCTTTATAAAGGAGTACCTCTTGCCCAGAGGCCAGACCCTCGCACCCTAGA TGCAGAATGGAGATCTGGGGTGGCCGGGCATCTCATTCTTTCAGATGAGGACGTGACTTC TGAGGTCCAGGGTCTGTGGAGGCGCTTGAACACCCTGCAGCATTACAAGGTCCCAGACGG AGCAACTGTGGCCCTCGTCCCCTGCCTCACCAAGCATGCTCTCCGGGAAAGCCAGGATTA TGTCCCTGGAGAGAGGACCCCAATGCTGGATGATGTGGACGATGGGGGCATCCGGCCCTG |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 2-163, gnl|bosTau2|chr22 (38990861-38990700) | |
| 2-163, gnl|canFam2|chr20 (43675654-43675450) | |
| 2-163, gnl|danRer3|chr23 (6097139-6097344) | |
| 2-163, gnl|dasNov1|scaffold_143789 (217-12) | |
| 2-163, gnl|echTel1|scaffold_309602 (51485-51280) | |
| 2-163, gnl|fr1|chrUn (261504941-261505131) | |
| 2-163, gnl|galGal2|chr12 (11349186-11348990) | |
| 2-163, gnl|hg17|chr3 (48428850-48429055) | |
| 2-163, gnl|Hg17|chr3 (48429015-48428854) | |
| 2-163, gnl|loxAfr1|scaffold_79284 (11113-10925) | |
| 2-163, gnl|mm7|chr9 (108822409-108822210) | |
| 2-163, gnl|Mm7|chr9 (108822242-108822403) | |
| 2-163, gnl|monDom2|scaffold_5 (84242279-84242081) | |
| 2-163, gnl|oryCun1|scaffold_194055 (4349-4548) | |
| 2-163, gnl|panTro1|chr2 (49913127-49913332) | |
| 2-163, gnl|rheMac2|chr2 (88070015-88069810) | |
| 2-163, gnl|rn3|chr8 (114145738-114145539) | |
| 2-163, gnl|tetNig1|chrUn_random (5001799-5001986) | |
| 2-163, gnl|xenTro1|scaffold_386 (647909-647689) | |
| 229-376, gnl|bosTau2|chr22 (38990288-38990141) | |
| 229-376, gnl|canFam2|chr20 (43676245-43676093) | |
| 229-376, gnl|danRer3|chr23 (6091927-6092079) | |
| 229-376, gnl|dasNov1|scaffold_143789 (689-537) | |
| 229-376, gnl|echTel1|scaffold_298064 (8974-9122) | |
| 229-376, gnl|fr1|chrUn (261504355-261504507) | |
| 229-376, gnl|galGal2|chr12 (11350707-11350559) | |
| 229-376, gnl|hg17|chr3 (48428273-48428425) | |
| 229-376, gnl|Hg17|chr3 (48428423-48428276) | |
| 229-376, gnl|loxAfr1|scaffold_82272 (6823-6671) | |
| 229-376, gnl|mm7|chr9 (108822919-108822767) | |
| 229-376, gnl|Mm7|chr9 (108822767-108822914) | |
| 229-376, gnl|monDom2|scaffold_5 (84246098-84245950) | |
| 229-376, gnl|oryCun1|scaffold_194055 (3865-4017) | |
| 229-376, gnl|panTro1|chr2 (49912550-49912702) | |
| 229-376, gnl|rheMac2|chr2 (88070592-88070440) | |
| 229-376, gnl|rn3|chr8 (114146317-114146165) | |
| 229-376, gnl|tetNig1|chrUn_random (5001222-5001374) | |
| 229-376, gnl|xenTro1|scaffold_386 (648754-648606) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-163, gnl|bosTau2|chr22 (38990861-38990700) | |
| 2-163, gnl|canFam2|chr20 (43675654-43675450) | |
| 2-163, gnl|danRer3|chr23 (6097139-6097344) | |
| 2-163, gnl|dasNov1|scaffold_143789 (217-12) | |
| 2-163, gnl|echTel1|scaffold_309602 (51485-51280) | |
| 2-163, gnl|fr1|chrUn (261504941-261505131) | |
| 2-163, gnl|galGal2|chr12 (11349186-11348990) | |
| 2-163, gnl|hg17|chr3 (48428850-48429055) | |
| 2-163, gnl|Hg17|chr3 (48429015-48428854) | |
| 2-163, gnl|loxAfr1|scaffold_79284 (11113-10925) | |
| 2-163, gnl|mm7|chr9 (108822409-108822210) | |
| 2-163, gnl|Mm7|chr9 (108822242-108822403) | |
| 2-163, gnl|monDom2|scaffold_5 (84242279-84242081) | |
| 2-163, gnl|oryCun1|scaffold_194055 (4349-4548) | |
| 2-163, gnl|panTro1|chr2 (49913127-49913332) | |
| 2-163, gnl|rheMac2|chr2 (88070015-88069810) | |
| 2-163, gnl|rn3|chr8 (114145738-114145539) | |
| 2-163, gnl|tetNig1|chrUn_random (5001799-5001986) | |
| 2-163, gnl|xenTro1|scaffold_386 (647909-647689) | |
| 229-376, gnl|bosTau2|chr22 (38990288-38990141) | |
| 229-376, gnl|canFam2|chr20 (43676245-43676093) | |
| 229-376, gnl|danRer3|chr23 (6091927-6092079) | |
| 229-376, gnl|dasNov1|scaffold_143789 (689-537) | |
| 229-376, gnl|echTel1|scaffold_298064 (8974-9122) | |
| 229-376, gnl|fr1|chrUn (261504355-261504507) | |
| 229-376, gnl|galGal2|chr12 (11350707-11350559) | |
| 229-376, gnl|hg17|chr3 (48428273-48428425) | |
| 229-376, gnl|Hg17|chr3 (48428423-48428276) | |
| 229-376, gnl|loxAfr1|scaffold_82272 (6823-6671) | |
| 229-376, gnl|mm7|chr9 (108822919-108822767) | |
| 229-376, gnl|Mm7|chr9 (108822767-108822914) | |
| 229-376, gnl|monDom2|scaffold_5 (84246098-84245950) | |
| 229-376, gnl|oryCun1|scaffold_194055 (3865-4017) | |
| 229-376, gnl|panTro1|chr2 (49912550-49912702) | |
| 229-376, gnl|rheMac2|chr2 (88070592-88070440) | |
| 229-376, gnl|rn3|chr8 (114146317-114146165) | |
| 229-376, gnl|tetNig1|chrUn_random (5001222-5001374) | |
| 229-376, gnl|xenTro1|scaffold_386 (648754-648606) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) |