Non-Coding RNA Search

Ss1.1-rplac_9983.5

Sequence:


               
               GTAGTTGTTTCAGAAACCCCAGAACCCACAATGACTAGTGGCGTGTATAGGCCTCCTGGG
GCCAGGTTGACCACAACAAGGAAAATACCACAAGGACCACCAGAAATCTACAGTGATACA
CAGTTCCCATCCCTGCAGTCCACTGCCAAGCATGTAGAAAGCCGGAAATACTGAGCCTTC
GTAAGGGTTGACTACCTCAGATTTGCTGCACTCATTGTGGACTTCATGTGGATCACAACT
TCTGGATAAGAAGGTTACAGCTATTAAGTGTCGGATGTGAAACTTGAAACCAGCTCTACT
GGACTTCCTATCAGAAATCCTGCAGAAAGTCAGCCATCTGGGTTCTGATCTGCTGTAAAA
GATGAAGATTTAAGTGACCTTAATTAACCTGTCCTGTGCCCCTTCCATAAGGAATACTCT
GTAGTGGGCTGTGGCTGTATTAGACTTCCTGGAACATGCCGCTCTCAAAAGAACTGATGT
ATTCAGATAATCTATATAGGGCTGTGATTTATAATTTAAACTTTGAGTTGTATTCTGAGG
TAACCACAAATTAAATTCAACCAAACTTGGGTCCACCAAGTGGGAAAAGGGGTAAGGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGTTGTTTCAGAAACCCCAGAACCCACAATGACTAGTGGCGTGTATAGGCCTCCTGGG
GCCAGGTTGACCACAACAAGGAAAATACCACAAGGACCACCAGAAATCTACAGTGATACA
CAGTTCCCATCCCTGCAGTCCACTGCCAAGCATGTAGAAAGCCGGAAATACTGAGCCTTC
GTAAGGGTTGACTACCTCAGATTTGCTGCACTCATTGTGGACTTCATGTGGATCACAACT
TCTGGATAAGAAGGTTACAGCTATTAAGTGTCGGATGTGAAACTTGAAACCAGCTCTACT
GGACTTCCTATCAGAAATCCTGCAGAAAGTCAGCCATCTGGGTTCTGATCTGCTGTAAAA
GATGAAGATTTAAGTGACCTTAATTAACCTGTCCTGTGCCCCTTCCATAAGGAATACTCT
GTAGTGGGCTGTGGCTGTATTAGACTTCCTGGAACATGCCGCTCTCAAAAGAACTGATGT
ATTCAGATAATCTATATAGGGCTGTGATTTATAATTTAAACTTTGAGTTGTATTCTGAGG
TAACCACAAATTAAATTCAACCAAACTTGGGTCCACCAAGTGGGAAAAGGGGTAAGGGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-594, gnl|bosTau2|chr1 (21917607-21918196)
               

               
               1-594, gnl|Hg17|chr3 (134785686-134790318)
               

               
               1-594, gnl|Mm7|chr4 (145544771-145543748)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-594, gnl|bosTau2|chr1 (21917607-21918196)
               

               
               1-594, gnl|Hg17|chr3 (134785686-134790318)
               

               
               1-594, gnl|Mm7|chr4 (145544771-145543748)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               clu (0.119646)

	1-594, gnl\|bosTau2\|chr1 (21917607-21918196)
	1-594, gnl\|Hg17\|chr3 (134785686-134790318)
	1-594, gnl\|Mm7\|chr4 (145544771-145543748)