Ss1.1-rpldo0103_j9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTTAGTTGGAGCAGTGACAAGGCCAACTGGAGGCATTATCGACATGGCTAGTAGTACA TTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGATGAAGTGGAGAGTCTGCGACCCCCT AGGTTTTTTAATGAAGATGGAGTTATCAGACCTTACAGGTTGAGAGATGGTACTGGAAAT CAAATGTTACAGAGTCATGGAAGATGGAAGATTTGCAAAATACAAATACTTTACCCATGT CATGATCAATAAAACAGATATGCTAATGATAACCAAAAGTGGCGTGTTGTTTGTAACAAA AGGAACATTTGGACAGCTTACGTGTGAATGGCAGTATAGTTTTGACGAGTTTACCAAAGA GCCATTCATTGTTCATGGGAGAAGGTTGCGCATTGAAGCAAAGGAACGGGTGAAGTCTGT ATTCCATGCCAAAGAGTTTGGAAAAATAATTAACTTCAAGACCCCAGAGGATGCTAGGTG GATCCTCAGAAAGCTAGAAGAAGCAAGAGAACCCTCCCCAAACCTCTGACAGAGACTACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTTAGTTGGAGCAGTGACAAGGCCAACTGGAGGCATTATCGACATGGCTAGTAGTACA TTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGATGAAGTGGAGAGTCTGCGACCCCCT AGGTTTTTTAATGAAGATGGAGTTATCAGACCTTACAGGTTGAGAGATGGTACTGGAAAT CAAATGTTACAGAGTCATGGAAGATGGAAGATTTGCAAAATACAAATACTTTACCCATGT CATGATCAATAAAACAGATATGCTAATGATAACCAAAAGTGGCGTGTTGTTTGTAACAAA AGGAACATTTGGACAGCTTACGTGTGAATGGCAGTATAGTTTTGACGAGTTTACCAAAGA GCCATTCATTGTTCATGGGAGAAGGTTGCGCATTGAAGCAAAGGAACGGGTGAAGTCTGT ATTCCATGCCAAAGAGTTTGGAAAAATAATTAACTTCAAGACCCCAGAGGATGCTAGGTG GATCCTCAGAAAGCTAGAAGAAGCAAGAGAACCCTCCCCAAACCTCTGACAGAGACTACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 76-238, gnl|bosTau2|chr16 (15405763-15405604) | |
| 76-238, gnl|Hg17|chr9 (77226444-77226600) | |
| 76-238, gnl|Mm7|chr19 (16336810-16336656) | |
| 278-404, gnl|bosTau2|chr16 (15384719-15384593) | |
| 278-404, gnl|canFam2|chr1 (84265573-84265428) | |
| 278-404, gnl|danRer3|chrUn (16866258-16866114) | |
| 278-404, gnl|dasNov1|scaffold_59649 (10448-10595) | |
| 278-404, gnl|echTel1|scaffold_298251 (124721-124571) | |
| 278-404, gnl|hg17|chr9 (77250312-77250464) | |
| 278-404, gnl|Hg17|chr9 (77250332-77250458) | |
| 278-404, gnl|loxAfr1|scaffold_2519 (91041-91189) | |
| 278-404, gnl|mm7|chr19 (16320448-16320301) | |
| 278-404, gnl|Mm7|chr19 (16320431-16320301) | |
| 278-404, gnl|monDom2|scaffold_80 (5154552-5154704) | |
| 278-404, gnl|oryCun1|scaffold_145647 (9983-9818) | |
| 278-404, gnl|panTro1|chr11 (61133493-61133645) | |
| 278-404, gnl|rheMac2|chr15 (86129710-86129862) | |
| 278-404, gnl|rn3|chr1 (220156498-220156350) | |
| 278-404, gnl|tetNig1|chr12 (7190769-7190900) | |
| 278-404, gnl|xenTro1|scaffold_320 (307509-307669) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-238, gnl|bosTau2|chr16 (15405763-15405604) | |
| 76-238, gnl|Hg17|chr9 (77226444-77226600) | |
| 76-238, gnl|Mm7|chr19 (16336810-16336656) | |
| 278-404, gnl|bosTau2|chr16 (15384719-15384593) | |
| 278-404, gnl|canFam2|chr1 (84265573-84265428) | |
| 278-404, gnl|danRer3|chrUn (16866258-16866114) | |
| 278-404, gnl|dasNov1|scaffold_59649 (10448-10595) | |
| 278-404, gnl|echTel1|scaffold_298251 (124721-124571) | |
| 278-404, gnl|hg17|chr9 (77250312-77250464) | |
| 278-404, gnl|Hg17|chr9 (77250332-77250458) | |
| 278-404, gnl|loxAfr1|scaffold_2519 (91041-91189) | |
| 278-404, gnl|mm7|chr19 (16320448-16320301) | |
| 278-404, gnl|Mm7|chr19 (16320431-16320301) | |
| 278-404, gnl|monDom2|scaffold_80 (5154552-5154704) | |
| 278-404, gnl|oryCun1|scaffold_145647 (9983-9818) | |
| 278-404, gnl|panTro1|chr11 (61133493-61133645) | |
| 278-404, gnl|rheMac2|chr15 (86129710-86129862) | |
| 278-404, gnl|rn3|chr1 (220156498-220156350) | |
| 278-404, gnl|tetNig1|chr12 (7190769-7190900) | |
| 278-404, gnl|xenTro1|scaffold_320 (307509-307669) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| cty (0.10408) | |
| ldo (0.0970026) |