Non-Coding RNA Search

Ss1.1-rpldo0105_a1.5

Sequence:


               
               TTTAACCATGGAGCCACGATGGAAACTCCCTATGTGTTGATTTGATTGATAGATGCACGC
TCATGATCAACCGAGGATGAGCTAGAATTCAGGTCATCATTGTACATTTCCTGTAGTCTA
AAATTTTACAAATGGAGGGATATTTTTTCTTTTTTTTTTGATTAATCCAACAATTTGCCT
GGTATCCATAATTTCATTTATAATCAGTGGAGTAAATAATCAGATGTGAACACCTGTTCT
TCCTCTATATATTCTGTTGAGCAGAAAAACAGCTGCAGGCCTCAGAAAGTAATAAATAAA
AACTTGCAACTAAAGTATTAGGCAAATCTAGTGACCTGTACATTTCAGATGTCTGAATAG
GGGAATTCTGTCTTCCCGAGAAAACTGCAGACCTGATAGTATTGTTACGACATTGGCAGT
ATTTCCTTATTAAGTTAATGCCAAGTTTTAATTTTTTTATAGTATATTGTTTTCTCTAAG
GGTAACCAAATTTTTTTAACTTATTACTCAGAAAGATTTGCATTTCTGTACACAGAAATT
TCTTGATTGTTTTAAATATATTAAACTGATTGTTTGAAAATGGAGGTGACACTCTTTGGA
AGATAATAGATCGTTACATATGTAAATCAATTAGATAAAGAGCTCTGTATGTAATCACTG
GCAAGCAGTAATTGGAGTTGTGTAAAGAAAATTTGTTTTATTATTAAGCATTTAAGTAGT
TCTGACTATGCATGAGGAATAACAACTGATAAAAAACAAATCTCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAACCATGGAGCCACGATGGAAACTCCCTATGTGTTGATTTGATTGATAGATGCACGC
TCATGATCAACCGAGGATGAGCTAGAATTCAGGTCATCATTGTACATTTCCTGTAGTCTA
AAATTTTACAAATGGAGGGATATTTTTTCTTTTTTTTTTGATTAATCCAACAATTTGCCT
GGTATCCATAATTTCATTTATAATCAGTGGAGTAAATAATCAGATGTGAACACCTGTTCT
TCCTCTATATATTCTGTTGAGCAGAAAAACAGCTGCAGGCCTCAGAAAGTAATAAATAAA
AACTTGCAACTAAAGTATTAGGCAAATCTAGTGACCTGTACATTTCAGATGTCTGAATAG
GGGAATTCTGTCTTCCCGAGAAAACTGCAGACCTGATAGTATTGTTACGACATTGGCAGT
ATTTCCTTATTAAGTTAATGCCAAGTTTTAATTTTTTTATAGTATATTGTTTTCTCTAAG
GGTAACCAAATTTTTTTAACTTATTACTCAGAAAGATTTGCATTTCTGTACACAGAAATT
TCTTGATTGTTTTAAATATATTAAACTGATTGTTTGAAAATGGAGGTGACACTCTTTGGA
AGATAATAGATCGTTACATATGTAAATCAATTAGATAAAGAGCTCTGTATGTAATCACTG
GCAAGCAGTAATTGGAGTTGTGTAAAGAAAATTTGTTTTATTATTAAGCATTTAAGTAGT
TCTGACTATGCATGAGGAATAACAACTGATAAAAAACAAATCTCTTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               29-768, gnl|bosTau2|chr9 (48596183-48595448)
               

               
               29-768, gnl|Hg17|chr6 (145974810-145974076)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-768, gnl|bosTau2|chr9 (48596183-48595448)
               

               
               29-768, gnl|Hg17|chr6 (145974810-145974076)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               tbr (0.154178)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               ldo (0.0970026)

	29-768, gnl\|bosTau2\|chr9 (48596183-48595448)
	29-768, gnl\|Hg17\|chr6 (145974810-145974076)