Non-Coding RNA Search

Ss1.1-rpldo0107_i9.5

Sequence:


               
               GGGAAGAGCGCCCTCCAGGAGGCAGCGGGCAAGCAGTGGTAGCCAGCGCCAGCGCAGGGG
GGTGGCCTCTCTGAGGTTTCCTGGGGTTGCTCAGCAGCCTCTGAGCAACTAAGGCTTACG
GTACTTCTCTCCTTCCCCCACCTCCCGTGACAGCCATTGTGAGACTGACGCCCAAACTGT
CACTTGGTTAATTTAAGCCCATCTGTTCTGGTGTAACTTGCTTGTTTGTTTCTTCATGCC
TTAACTTACTGTCTTTGTCCCGTGATACTGATTGGCACGTAGCTCACAAAATGTCAAAAT
AAAGCCCCTTTGTCCTCTTTACAAGAAACACAAGAAATTGGCCATGGGCAAACTCTGGCT
TGGAGTGTTCTTCATTTAGTGCCGTCCAAGGAAATGTCCTTCCTTTTCTTTTTTTGCATG
GTTTTGTCCACCTCTACAATAATAATCTGATGTTGAAGATCAAATAACCAATATAAAGCG
TATTTCTTGACCTTGCTCCATAGGTTGTAAGCAAAGCCTCCATCACAGTTCATACAAATA
AAAGGTGGTAAAATAAAGGAATAAACTCTAATATTTCTACTTGAAATGTAAATAACATTT
TCTTTGCTCAGTCTGGAGCTCTAGTGCACATTCAGTGTTACACTGCTGAATATAGGGTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAGAGCGCCCTCCAGGAGGCAGCGGGCAAGCAGTGGTAGCCAGCGCCAGCGCAGGGG
GGTGGCCTCTCTGAGGTTTCCTGGGGTTGCTCAGCAGCCTCTGAGCAACTAAGGCTTACG
GTACTTCTCTCCTTCCCCCACCTCCCGTGACAGCCATTGTGAGACTGACGCCCAAACTGT
CACTTGGTTAATTTAAGCCCATCTGTTCTGGTGTAACTTGCTTGTTTGTTTCTTCATGCC
TTAACTTACTGTCTTTGTCCCGTGATACTGATTGGCACGTAGCTCACAAAATGTCAAAAT
AAAGCCCCTTTGTCCTCTTTACAAGAAACACAAGAAATTGGCCATGGGCAAACTCTGGCT
TGGAGTGTTCTTCATTTAGTGCCGTCCAAGGAAATGTCCTTCCTTTTCTTTTTTTGCATG
GTTTTGTCCACCTCTACAATAATAATCTGATGTTGAAGATCAAATAACCAATATAAAGCG
TATTTCTTGACCTTGCTCCATAGGTTGTAAGCAAAGCCTCCATCACAGTTCATACAAATA
AAAGGTGGTAAAATAAAGGAATAAACTCTAATATTTCTACTTGAAATGTAAATAACATTT
TCTTTGCTCAGTCTGGAGCTCTAGTGCACATTCAGTGTTACACTGCTGAATATAGGGTAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-659, gnl|bosTau2|chr10 (8584749-8584094)
               

               
               1-659, gnl|Hg17|chr15 (63276236-63275562)
               

               
               1-659, gnl|Mm7|chr9 (65309706-65310306)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-659, gnl|bosTau2|chr10 (8584749-8584094)
               

               
               1-659, gnl|Hg17|chr15 (63276236-63275562)
               

               
               1-659, gnl|Mm7|chr9 (65309706-65310306)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               fat (0.294855)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.294855)
               

               
               ldo (0.0970026)

	1-659, gnl\|bosTau2\|chr10 (8584749-8584094)
	1-659, gnl\|Hg17\|chr15 (63276236-63275562)
	1-659, gnl\|Mm7\|chr9 (65309706-65310306)