Ss1.1-rpldo0108_k15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTTGATTTTGTGTAGTTTCGGCGCCAACTGCTCTGAACTTTGCTTGGTAAAGGATTCGA GAGGCGTCTTCGCCAGTCGTGGGGCGAGGTGCAGCCTTAGCAATGAGTGTTTTTGAACCT TAAGGAAACTGGTCGGCAGCGTCGCTACCCAGAGGCATTGAGGATAAGAGATATTTTGAA GACTTTTATAATTATTTTGTTTAAGTCAAGATGTCTAGCAAAGCAAATGCCTCCAAGAGA AGGTCTCAACCATTAAAAAGAAATTCAAAAAGAAAAATTGGTGAGAAAGAAGCAGAGTTA TCTGAGAAAGAGGTTAGAAACACAGTGAAAAAAAATAAAAGTCATCCAAAGCATCTGTCT TCTGAAGTAACTGGACAAACAAAGCATACTAGTCTAAAAGAGGTAAAGATTGCATCACAC AAGAGAAAAACCTGGCAACCTCTTTCAAAAAATAGCAGAGAACATTTGCAAACTATGATG GAATCAGTAATAATAGCAATTTTGAGTAACAAAACTAGAGAAAGTGAACAAATTCAGTAT CATCTAAACTTCCTCAAGAAAAGGTAGTATAATTTATGCAATAAAAAGAATTGGTTGAAA TGTAATTAGTGAAAGTCCAGTATGTTTCTGTGTTGCCAGACCAAACATTTGTGAACTATA AAAGTTTTTCCTTTTGGGTTTTCATTCTTGTTATTATTGTTGATTTAAGAAGATGAACAA TTTGGGGATATGTATTCTACCCTTAAACTGCTGCTGCATTAATTCTGAAGTAAGTTAAGA GAATTTATAAAGAACCTGGAAATCAAAAACATCTACTTCCACAGTTCACTTCTCTGCATA GAAATCTGTAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTTGATTTTGTGTAGTTTCGGCGCCAACTGCTCTGAACTTTGCTTGGTAAAGGATTCGA GAGGCGTCTTCGCCAGTCGTGGGGCGAGGTGCAGCCTTAGCAATGAGTGTTTTTGAACCT TAAGGAAACTGGTCGGCAGCGTCGCTACCCAGAGGCATTGAGGATAAGAGATATTTTGAA GACTTTTATAATTATTTTGTTTAAGTCAAGATGTCTAGCAAAGCAAATGCCTCCAAGAGA AGGTCTCAACCATTAAAAAGAAATTCAAAAAGAAAAATTGGTGAGAAAGAAGCAGAGTTA TCTGAGAAAGAGGTTAGAAACACAGTGAAAAAAAATAAAAGTCATCCAAAGCATCTGTCT TCTGAAGTAACTGGACAAACAAAGCATACTAGTCTAAAAGAGGTAAAGATTGCATCACAC AAGAGAAAAACCTGGCAACCTCTTTCAAAAAATAGCAGAGAACATTTGCAAACTATGATG GAATCAGTAATAATAGCAATTTTGAGTAACAAAACTAGAGAAAGTGAACAAATTCAGTAT CATCTAAACTTCCTCAAGAAAAGGTAGTATAATTTATGCAATAAAAAGAATTGGTTGAAA TGTAATTAGTGAAAGTCCAGTATGTTTCTGTGTTGCCAGACCAAACATTTGTGAACTATA AAAGTTTTTCCTTTTGGGTTTTCATTCTTGTTATTATTGTTGATTTAAGAAGATGAACAA TTTGGGGATATGTATTCTACCCTTAAACTGCTGCTGCATTAATTCTGAAGTAAGTTAAGA GAATTTATAAAGAACCTGGAAATCAAAAACATCTACTTCCACAGTTCACTTCTCTGCATA GAAATCTGTAAA |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 173-314, gnl|bosTau2|chr23 (19925500-19925359) | |
| 173-314, gnl|canFam2|chr12 (20345762-20346012) | |
| 173-314, gnl|dasNov1|scaffold_15568 (56047-56301) | |
| 173-314, gnl|echTel1|scaffold_316686 (48339-48604) | |
| 173-314, gnl|hg17|chr6 (49545743-49545994) | |
| 173-314, gnl|Hg17|chr6 (49545812-49545952) | |
| 173-314, gnl|loxAfr1|scaffold_8241 (36123-36363) | |
| 173-314, gnl|mm7|chr17 (38973921-38973698) | |
| 173-314, gnl|Mm7|chr17 (38973864-38973728) | |
| 173-314, gnl|oryCun1|scaffold_195602 (76902-77161) | |
| 173-314, gnl|panTro1|chr5_random (29713392-29713137) | |
| 173-314, gnl|rheMac2|chr4 (49214422-49214668) | |
| 173-314, gnl|rn3|chr9 (16093813-16094091) | |
| 346-494, gnl|bosTau2|chr23 (19923190-19923042) | |
| 346-494, gnl|canFam2|chr12 (20348353-20348757) | |
| 346-494, gnl|dasNov1|scaffold_10018 (117667-118067) | |
| 346-494, gnl|echTel1|scaffold_316686 (50231-50532) | |
| 346-494, gnl|galGal2|chr3 (106680335-106679985) | |
| 346-494, gnl|hg17|chr6 (49547496-49547888) | |
| 346-494, gnl|Hg17|chr6 (49547707-49547855) | |
| 346-494, gnl|loxAfr1|scaffold_8241 (38015-38407) | |
| 346-494, gnl|mm7|chr17 (38972643-38972261) | |
| 346-494, gnl|Mm7|chr17 (38972447-38972299) | |
| 346-494, gnl|oryCun1|scaffold_158325 (694-294) | |
| 346-494, gnl|panTro1|chr5 (50338798-50339190) | |
| 346-494, gnl|rn3|chr9 (16095095-16095468) | |
| 497-776, gnl|bosTau2|chr23 (19919701-19919424) | |
| 497-776, gnl|Hg17|chr6 (49548464-49548713) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 173-314, gnl|bosTau2|chr23 (19925500-19925359) | |
| 173-314, gnl|canFam2|chr12 (20345762-20346012) | |
| 173-314, gnl|dasNov1|scaffold_15568 (56047-56301) | |
| 173-314, gnl|echTel1|scaffold_316686 (48339-48604) | |
| 173-314, gnl|hg17|chr6 (49545743-49545994) | |
| 173-314, gnl|Hg17|chr6 (49545812-49545952) | |
| 173-314, gnl|loxAfr1|scaffold_8241 (36123-36363) | |
| 173-314, gnl|mm7|chr17 (38973921-38973698) | |
| 173-314, gnl|Mm7|chr17 (38973864-38973728) | |
| 173-314, gnl|oryCun1|scaffold_195602 (76902-77161) | |
| 173-314, gnl|panTro1|chr5_random (29713392-29713137) | |
| 173-314, gnl|rheMac2|chr4 (49214422-49214668) | |
| 173-314, gnl|rn3|chr9 (16093813-16094091) | |
| 346-494, gnl|bosTau2|chr23 (19923190-19923042) | |
| 346-494, gnl|canFam2|chr12 (20348353-20348757) | |
| 346-494, gnl|dasNov1|scaffold_10018 (117667-118067) | |
| 346-494, gnl|echTel1|scaffold_316686 (50231-50532) | |
| 346-494, gnl|galGal2|chr3 (106680335-106679985) | |
| 346-494, gnl|hg17|chr6 (49547496-49547888) | |
| 346-494, gnl|Hg17|chr6 (49547707-49547855) | |
| 346-494, gnl|loxAfr1|scaffold_8241 (38015-38407) | |
| 346-494, gnl|mm7|chr17 (38972643-38972261) | |
| 346-494, gnl|Mm7|chr17 (38972447-38972299) | |
| 346-494, gnl|oryCun1|scaffold_158325 (694-294) | |
| 346-494, gnl|panTro1|chr5 (50338798-50339190) | |
| 346-494, gnl|rn3|chr9 (16095095-16095468) | |
| 497-776, gnl|bosTau2|chr23 (19919701-19919424) | |
| 497-776, gnl|Hg17|chr6 (49548464-49548713) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ldo (0.0970026) |