Non-Coding RNA Search

Ss1.1-rpldo0109_h4.5

Sequence:


               
               GAAGCCATATGAGTGTGGGGACTGCAGGAAGGCCTTCATTCACAGCACCTCCCTCACCAA
ACATCAGTCCACCCACAAGAGTGAGCAACTCTTTAAATTTAACGAATGTAGTAAGACCTT
ACACCAAAGTGCATACCTCTTAGAACATCAGTTAACCCACCCTGCAGAGAAGCCCTTTAA
ACATTACATGTGTGATGAAGTCTCTGCCCACAGTAACTACCTTATTCAGCATCAGGGAAC
TCAGGCTGGAAAGGAGTCCTTTGAGCATCACGAATGTGGGGAAATGGTCCAGCAGAGCTC
GTGCCTTTCCCAGCATCAGAGAGTTCGCACAATAGAGAAACCCTACAAATGTGGTGATTG
TGGGAAAACCTTCAGCCTGGGTGCTCAGCTTGTCCAACACCAGAGAGTGCACACAGGAGA
AAAGCCTTACATTTGTCAGGAATGCGGGAAAGCCTTCAGCCAGAGCTCATGCCTTTCTAA
GCATCAGAGAGTTCACACAGGTGAGAAGCCCTATGAATGTGGCTACTGTGGGAAAACCTT
CAGCCGGGGTGCACCACTCGTCCGACACCAAAGAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGCCATATGAGTGTGGGGACTGCAGGAAGGCCTTCATTCACAGCACCTCCCTCACCAA
ACATCAGTCCACCCACAAGAGTGAGCAACTCTTTAAATTTAACGAATGTAGTAAGACCTT
ACACCAAAGTGCATACCTCTTAGAACATCAGTTAACCCACCCTGCAGAGAAGCCCTTTAA
ACATTACATGTGTGATGAAGTCTCTGCCCACAGTAACTACCTTATTCAGCATCAGGGAAC
TCAGGCTGGAAAGGAGTCCTTTGAGCATCACGAATGTGGGGAAATGGTCCAGCAGAGCTC
GTGCCTTTCCCAGCATCAGAGAGTTCGCACAATAGAGAAACCCTACAAATGTGGTGATTG
TGGGAAAACCTTCAGCCTGGGTGCTCAGCTTGTCCAACACCAGAGAGTGCACACAGGAGA
AAAGCCTTACATTTGTCAGGAATGCGGGAAAGCCTTCAGCCAGAGCTCATGCCTTTCTAA
GCATCAGAGAGTTCACACAGGTGAGAAGCCCTATGAATGTGGCTACTGTGGGAAAACCTT
CAGCCGGGGTGCACCACTCGTCCGACACCAAAGAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-522, gnl|bosTau2|chr10 (8996508-8995987)
               

               
               1-522, gnl|Hg17|chr19 (42818313-42817755)
               

               
               1-522, gnl|Mm7|chr2 (127309939-127309502)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-522, gnl|bosTau2|chr10 (8996508-8995987)
               

               
               1-522, gnl|Hg17|chr19 (42818313-42817755)
               

               
               1-522, gnl|Mm7|chr2 (127309939-127309502)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	1-522, gnl\|bosTau2\|chr10 (8996508-8995987)
	1-522, gnl\|Hg17\|chr19 (42818313-42817755)
	1-522, gnl\|Mm7\|chr2 (127309939-127309502)