Ss1.1-rpldo0109_n2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCAGACAACACTCGCCGGAGGGTGAGGGCCTCAGATCTTTTTCTGGAATTAAAGGACT CCAGCTGAAAGTTAACCTCCAACCCAATGACAATTACTTTTTCTACGTGAGAGCCATCAA TGCATTCGGGACAAGTGAACAGAGTGAAGCTGCCCTCATTTCCACCAGAGGAACCAGATT TCTCTTATTGAGAGAAACGGCTCATCCTGCTCTGCAGATTTCCTCAAGTGGGACAGTGAT TAGCTTCGCTGAGAGGAGACGCCTGACAGAAATCCCATCAGTGCTGGGTGAGGAGCTGCC TGCTTGCGGCCGGCATTACTGGGAAACCACCGTCACAGACTGCCCAGCTTACCGACTTGG CATCTGCTCCAGCTCGGCCGTGCAGGCCGGCACCCTGGGACAGGGGGAGAGCTCGTGGTA CATGCACTGCTCTGAGCCGCAGAGATACACATTTTTCTACAGTGGCATTGTGAGCGATGT CCATGTGACGGAGCATCCCGCCAGAGTGGGCATCCTGCTGGACTACACCACCCAGAGGCT CCTGTTTCTAAACGCCGAGACTGGACAGTTGCTCTTCATCATTAGGCACCGGTTCAATGA GGGGGTCCACCCTGCCTTTGCCCTGGAGAAACCCGGAAAGTGTACTTTGCACCTGGGGAT CGAGCCCCCGGATTCTGCAAGGCACAAGTGATCTTGGCTTTCAAAGTTTGCCAGAGCAAT CATTCAAATTGGGGTGGGGGACTCTCTCTTGTTCTTTCCTGTGGGCGCTAAACATTATTC AAAAACCTCTTCTGCACATGTGCGCTAATGACAGCTCCACGCACAGTGATCAGCATGCGA GCAAAGCCACTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCAGACAACACTCGCCGGAGGGTGAGGGCCTCAGATCTTTTTCTGGAATTAAAGGACT CCAGCTGAAAGTTAACCTCCAACCCAATGACAATTACTTTTTCTACGTGAGAGCCATCAA TGCATTCGGGACAAGTGAACAGAGTGAAGCTGCCCTCATTTCCACCAGAGGAACCAGATT TCTCTTATTGAGAGAAACGGCTCATCCTGCTCTGCAGATTTCCTCAAGTGGGACAGTGAT TAGCTTCGCTGAGAGGAGACGCCTGACAGAAATCCCATCAGTGCTGGGTGAGGAGCTGCC TGCTTGCGGCCGGCATTACTGGGAAACCACCGTCACAGACTGCCCAGCTTACCGACTTGG CATCTGCTCCAGCTCGGCCGTGCAGGCCGGCACCCTGGGACAGGGGGAGAGCTCGTGGTA CATGCACTGCTCTGAGCCGCAGAGATACACATTTTTCTACAGTGGCATTGTGAGCGATGT CCATGTGACGGAGCATCCCGCCAGAGTGGGCATCCTGCTGGACTACACCACCCAGAGGCT CCTGTTTCTAAACGCCGAGACTGGACAGTTGCTCTTCATCATTAGGCACCGGTTCAATGA GGGGGTCCACCCTGCCTTTGCCCTGGAGAAACCCGGAAAGTGTACTTTGCACCTGGGGAT CGAGCCCCCGGATTCTGCAAGGCACAAGTGATCTTGGCTTTCAAAGTTTGCCAGAGCAAT CATTCAAATTGGGGTGGGGGACTCTCTCTTGTTCTTTCCTGTGGGCGCTAAACATTATTC AAAAACCTCTTCTGCACATGTGCGCTAATGACAGCTCCACGCACAGTGATCAGCATGCGA GCAAAGCCACTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 35-174, gnl|bosTau2|chr10 (5295064-5294925) | |
| 35-174, gnl|canFam2|chr3 (30073686-30073526) | |
| 35-174, gnl|danRer3|chr16 (46813217-46813371) | |
| 35-174, gnl|dasNov1|scaffold_73 (306200-306041) | |
| 35-174, gnl|echTel1|scaffold_282589 (846-1005) | |
| 35-174, gnl|fr1|chrUn (92132807-92132670) | |
| 35-174, gnl|galGal2|chrZ (5357429-5357291) | |
| 35-174, gnl|hg17|chr5 (79120527-79120687) | |
| 35-174, gnl|Hg17|chr5 (79120548-79120687) | |
| 35-174, gnl|loxAfr1|scaffold_8301 (52166-52326) | |
| 35-174, gnl|mm7|chr13 (90113213-90113055) | |
| 35-174, gnl|Mm7|chr13 (90113193-90113054) | |
| 35-174, gnl|monDom2|scaffold_27 (36217883-36217722) | |
| 35-174, gnl|panTro1|chr4 (36071054-36070894) | |
| 35-174, gnl|rheMac2|chr6 (76005408-76005568) | |
| 35-174, gnl|rn3|chr2 (23251084-23250927) | |
| 35-174, gnl|tetNig1|chr12 (2945206-2945344) | |
| 35-174, gnl|xenTro1|scaffold_183 (1329308-1329161) | |
| 443-850, gnl|bosTau2|chr10 (5285070-5284651) | |
| 443-850, gnl|Hg17|chr5 (79130947-79131349) | |
| 443-850, gnl|Mm7|chr13 (90104483-90104081) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 35-174, gnl|bosTau2|chr10 (5295064-5294925) | |
| 35-174, gnl|canFam2|chr3 (30073686-30073526) | |
| 35-174, gnl|danRer3|chr16 (46813217-46813371) | |
| 35-174, gnl|dasNov1|scaffold_73 (306200-306041) | |
| 35-174, gnl|echTel1|scaffold_282589 (846-1005) | |
| 35-174, gnl|fr1|chrUn (92132807-92132670) | |
| 35-174, gnl|galGal2|chrZ (5357429-5357291) | |
| 35-174, gnl|hg17|chr5 (79120527-79120687) | |
| 35-174, gnl|Hg17|chr5 (79120548-79120687) | |
| 35-174, gnl|loxAfr1|scaffold_8301 (52166-52326) | |
| 35-174, gnl|mm7|chr13 (90113213-90113055) | |
| 35-174, gnl|Mm7|chr13 (90113193-90113054) | |
| 35-174, gnl|monDom2|scaffold_27 (36217883-36217722) | |
| 35-174, gnl|panTro1|chr4 (36071054-36070894) | |
| 35-174, gnl|rheMac2|chr6 (76005408-76005568) | |
| 35-174, gnl|rn3|chr2 (23251084-23250927) | |
| 35-174, gnl|tetNig1|chr12 (2945206-2945344) | |
| 35-174, gnl|xenTro1|scaffold_183 (1329308-1329161) | |
| 443-850, gnl|bosTau2|chr10 (5285070-5284651) | |
| 443-850, gnl|Hg17|chr5 (79130947-79131349) | |
| 443-850, gnl|Mm7|chr13 (90104483-90104081) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| ldo (0.679018) | |
| hlv (0.278513) | |
| ste (0.270416) | |
| nms (0.213858) | |
| mas (0.210305) | |
| hea (0.204499) | |
| tbr (0.154178) | |
| che (0.136314) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ldo (0.679018) | |
| hlv (0.278513) | |
| ste (0.270416) | |
| nms (0.213858) | |
| mas (0.210305) | |
| hea (0.204499) | |
| tbr (0.154178) | |
| che (0.136314) |