Non-Coding RNA Search

Ss1.1-rpldo0115_d14.5

Sequence:


               
               GTGGACACATTTGTCACCGCTGGGTCTCCTTCTTATCTGTGACAGTGTGCCTTGCAGATG
CTGCCTCCTCTCACCTTATGATTGAACTAGAGTTTGGCATGCCAGTAGCATGCATGGTCT
ACATGGCTAAAAAGCCATCCTGAAAACCCCTGTAGGTCAATGGGTAAGGGTGGCTGGAGG
AGGCATTACAGTTAGCTCTGTGTCTGTTTCTATGAAATTCTTCCACTTATGTTTACTTTG
ACCAACAGTAAGTTCAGAGATTCTAAATCTAGCCCCATACCAAACCATTCCAAGTAGGTG
ATTCTAGATCTATCCCAAGGATCAGTGCCTACAGCATGTTGGCAGGTATTAGAAAACAAA
TTTTTTTTTAAGCAGAGCCTCAGAGGATAGGCAATGCTGATCCTAGCAAAAATGTATCAA
GTTTCGAAAGCAACTTGTCCTTGAAACCATCCCACTGCTTATCTGCTGCTTCTTTCTATC
CTCTCCACAAGTCTTACTCCTTTGAGGCTGGTAACTGCAATTTAAGATGGTAGCTGATTG
AGGTTTAAGGTTTGAGCCCTTCCAAGGGTCTGTGCATTTTGGAAGGAAATTTCTAAAAAT
TGTGAAGGTGTCCTAGCTCCCTTTCTCATGATTCCTACTCAGAAATGTGGGTAGGTGGGA
ACCCAGAGTTCCAGGGAAATCTTTTTCCTGGTTTCCAGACCTCCAACCTGTTGGACTTTT
GCCAATATGGTACATGTCGGTTATTCTTATGAATCTAATCCTTTAATATTTTTTACACAA
TGTTTCTTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGACACATTTGTCACCGCTGGGTCTCCTTCTTATCTGTGACAGTGTGCCTTGCAGATG
CTGCCTCCTCTCACCTTATGATTGAACTAGAGTTTGGCATGCCAGTAGCATGCATGGTCT
ACATGGCTAAAAAGCCATCCTGAAAACCCCTGTAGGTCAATGGGTAAGGGTGGCTGGAGG
AGGCATTACAGTTAGCTCTGTGTCTGTTTCTATGAAATTCTTCCACTTATGTTTACTTTG
ACCAACAGTAAGTTCAGAGATTCTAAATCTAGCCCCATACCAAACCATTCCAAGTAGGTG
ATTCTAGATCTATCCCAAGGATCAGTGCCTACAGCATGTTGGCAGGTATTAGAAAACAAA
TTTTTTTTTAAGCAGAGCCTCAGAGGATAGGCAATGCTGATCCTAGCAAAAATGTATCAA
GTTTCGAAAGCAACTTGTCCTTGAAACCATCCCACTGCTTATCTGCTGCTTCTTTCTATC
CTCTCCACAAGTCTTACTCCTTTGAGGCTGGTAACTGCAATTTAAGATGGTAGCTGATTG
AGGTTTAAGGTTTGAGCCCTTCCAAGGGTCTGTGCATTTTGGAAGGAAATTTCTAAAAAT
TGTGAAGGTGTCCTAGCTCCCTTTCTCATGATTCCTACTCAGAAATGTGGGTAGGTGGGA
ACCCAGAGTTCCAGGGAAATCTTTTTCCTGGTTTCCAGACCTCCAACCTGTTGGACTTTT
GCCAATATGGTACATGTCGGTTATTCTTATGAATCTAATCCTTTAATATTTTTTACACAA
TGTTTCTTTTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-789, gnl|bosTau2|chr9 (34155426-34156207)
               

               
               1-789, gnl|Hg17|chr6 (90133431-90132340)
               

               
               1-789, gnl|Mm7|chr4 (33298380-33299501)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-789, gnl|bosTau2|chr9 (34155426-34156207)
               

               
               1-789, gnl|Hg17|chr6 (90133431-90132340)
               

               
               1-789, gnl|Mm7|chr4 (33298380-33299501)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               kid (0.129735)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               ldo (0.0970026)

	1-789, gnl\|bosTau2\|chr9 (34155426-34156207)
	1-789, gnl\|Hg17\|chr6 (90133431-90132340)
	1-789, gnl\|Mm7\|chr4 (33298380-33299501)