Ss1.1-rpldo0123_c21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCCTGCGTCCAGGAGGACAATCTCGACCACCAACAGCACGAACCAGCAGTTCAGGATCC TTGGGATCAGAGTCTACAAATTTGGCTGCCCTCTCTCTAGATTCTCTTGTTGCTCCAGAT ACACCAATACAGTTTGATATAATTTCTCCTGTGTGTGAAGATCAGCCTGGCCAGGCAAAA GCCTTTGGTCAAGGAGGCAGGCGTACAAATCCATTTGGAGAATCTGGAGGAAGCACAAAA TCAGAAACTGAAGACTCTATTCTTCATCAGTTGTTTATTGTCCGATTCCTTGGTTCTATG GAGGTAAAGTCAGATGACCATCCAGATGTTGTCTATGAAACAATGCGTCAAATCTTAGCT GCCCGGGCCATCCATAACATTTTTCGTATGACAGAATCACATTTATTAGTCACTTGTGAT TGTTTAAAGTTAATTGATCCACAGACACAAGTTACAAGGCTCACGTTTCCGTTACCTAGT GTAGTTTTGTATGCTACACACCAGGAAAATAAGAGGCTTTTTGGATTTGTTCTTCGGACA TCAGGAGGGAGAAGTGAAAGTAATCTGTCATCCGTCTGCTATATATTTGAATCAAACAAT GAGGGTGAAAAGGTACATGGCTTTTCAAAATGTGTTTCTTTTGTGAAATGCATATCATAA TCAAAGTTCTTAGTAAGATTTCTGGAAAAAACTCCCAATCTTTGCCTGGTCCAGCCGAGT TCCTTGAACAAAGCCTGTTGCTCTTAAGAGAGCTGAGATGATGGGTTGGGCCTTCTGACC CTACAGACCTGTGTCTTCTGGTCATTGATGGATGGTACAGTCTTCTGGCATCATTAACTT ATCCTTGGGAATGCAAAGTATTCCCATAACCAGCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCCTGCGTCCAGGAGGACAATCTCGACCACCAACAGCACGAACCAGCAGTTCAGGATCC TTGGGATCAGAGTCTACAAATTTGGCTGCCCTCTCTCTAGATTCTCTTGTTGCTCCAGAT ACACCAATACAGTTTGATATAATTTCTCCTGTGTGTGAAGATCAGCCTGGCCAGGCAAAA GCCTTTGGTCAAGGAGGCAGGCGTACAAATCCATTTGGAGAATCTGGAGGAAGCACAAAA TCAGAAACTGAAGACTCTATTCTTCATCAGTTGTTTATTGTCCGATTCCTTGGTTCTATG GAGGTAAAGTCAGATGACCATCCAGATGTTGTCTATGAAACAATGCGTCAAATCTTAGCT GCCCGGGCCATCCATAACATTTTTCGTATGACAGAATCACATTTATTAGTCACTTGTGAT TGTTTAAAGTTAATTGATCCACAGACACAAGTTACAAGGCTCACGTTTCCGTTACCTAGT GTAGTTTTGTATGCTACACACCAGGAAAATAAGAGGCTTTTTGGATTTGTTCTTCGGACA TCAGGAGGGAGAAGTGAAAGTAATCTGTCATCCGTCTGCTATATATTTGAATCAAACAAT GAGGGTGAAAAGGTACATGGCTTTTCAAAATGTGTTTCTTTTGTGAAATGCATATCATAA TCAAAGTTCTTAGTAAGATTTCTGGAAAAAACTCCCAATCTTTGCCTGGTCCAGCCGAGT TCCTTGAACAAAGCCTGTTGCTCTTAAGAGAGCTGAGATGATGGGTTGGGCCTTCTGACC CTACAGACCTGTGTCTTCTGGTCATTGATGGATGGTACAGTCTTCTGGCATCATTAACTT ATCCTTGGGAATGCAAAGTATTCCCATAACCAGCTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 17-201, gnl|bosTau2|chr22 (33167040-33167224) | |
| 17-201, gnl|Hg17|chr3 (57266313-57266497) | |
| 17-201, gnl|Mm7|chr14 (24375598-24375414) | |
| 249-430, gnl|bosTau2|chr22 (33169209-33169390) | |
| 249-430, gnl|canFam2|chr20 (36135170-36134967) | |
| 249-430, gnl|danRer3|chr19 (65049230-65049041) | |
| 249-430, gnl|dasNov1|scaffold_56008 (9582-9784) | |
| 249-430, gnl|echTel1|scaffold_317294 (30181-30382) | |
| 249-430, gnl|fr1|chrUn (263486247-263486446) | |
| 249-430, gnl|galGal2|chr12 (8690526-8690724) | |
| 249-430, gnl|hg17|chr3 (57268897-57269098) | |
| 249-430, gnl|Hg17|chr3 (57268908-57269089) | |
| 249-430, gnl|loxAfr1|scaffold_54581 (11144-10950) | |
| 249-430, gnl|mm7|chr14 (24361518-24361316) | |
| 249-430, gnl|Mm7|chr14 (24361505-24361324) | |
| 249-430, gnl|monDom2|scaffold_5 (2270562-2270762) | |
| 249-430, gnl|oryCun1|scaffold_137000 (2282-2456) | |
| 249-430, gnl|panTro1|chr2 (58936494-58936695) | |
| 249-430, gnl|rheMac2|chr2 (79113405-79113204) | |
| 249-430, gnl|rn3|chr16 (2187836-2187634) | |
| 249-430, gnl|tetNig1|chrUn_random (5508421-5508238) | |
| 249-430, gnl|xenTro1|scaffold_80 (2502857-2502664) | |
| 465-874, gnl|bosTau2|chr22 (33170368-33170770) | |
| 465-874, gnl|Hg17|chr3 (57269695-57276489) | |
| 465-874, gnl|Mm7|chr14 (24360643-24360261) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 17-201, gnl|bosTau2|chr22 (33167040-33167224) | |
| 17-201, gnl|Hg17|chr3 (57266313-57266497) | |
| 17-201, gnl|Mm7|chr14 (24375598-24375414) | |
| 249-430, gnl|bosTau2|chr22 (33169209-33169390) | |
| 249-430, gnl|canFam2|chr20 (36135170-36134967) | |
| 249-430, gnl|danRer3|chr19 (65049230-65049041) | |
| 249-430, gnl|dasNov1|scaffold_56008 (9582-9784) | |
| 249-430, gnl|echTel1|scaffold_317294 (30181-30382) | |
| 249-430, gnl|fr1|chrUn (263486247-263486446) | |
| 249-430, gnl|galGal2|chr12 (8690526-8690724) | |
| 249-430, gnl|hg17|chr3 (57268897-57269098) | |
| 249-430, gnl|Hg17|chr3 (57268908-57269089) | |
| 249-430, gnl|loxAfr1|scaffold_54581 (11144-10950) | |
| 249-430, gnl|mm7|chr14 (24361518-24361316) | |
| 249-430, gnl|Mm7|chr14 (24361505-24361324) | |
| 249-430, gnl|monDom2|scaffold_5 (2270562-2270762) | |
| 249-430, gnl|oryCun1|scaffold_137000 (2282-2456) | |
| 249-430, gnl|panTro1|chr2 (58936494-58936695) | |
| 249-430, gnl|rheMac2|chr2 (79113405-79113204) | |
| 249-430, gnl|rn3|chr16 (2187836-2187634) | |
| 249-430, gnl|tetNig1|chrUn_random (5508421-5508238) | |
| 249-430, gnl|xenTro1|scaffold_80 (2502857-2502664) | |
| 465-874, gnl|bosTau2|chr22 (33170368-33170770) | |
| 465-874, gnl|Hg17|chr3 (57269695-57276489) | |
| 465-874, gnl|Mm7|chr14 (24360643-24360261) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ldo (0.0970026) |