Non-Coding RNA Search

Ss1.1-rpldo0124_f3.5

Sequence:


               
               AGAATTCCACCATACTGCGTCCCTTTCACAAATTGCAGAAAGCATTGAATTATCTGAGAA
ATGTGCAGAAGAGGTACCAGGGGACATGCCAAAGATTCTCCTGCATCTTCAGGACCTCTC
TGTAAAGTGCGACGACACGGCTCATTTCCTCTGTGTTTTAGAAGATGAGTCTTTTGTTGA
TGTAACCTGGACTTATGAAGGTGTAACAATAGAGAAATCTAAGAGAGTGAAGCAGTCACA
AAACCATATATAATGTTCAATTCAATTTCTTACCATATATATGTTCAACTGGTAGACCAA
GGATTGTACAGCTGCATCGTACACAATGAGCATGGAGAGAAGACAACGTCAGCAGTTCTA
AGAGTAGAAGGTGGTTATTTGATTTTTAGCTGTGACTTGCTTCATTTCATCCTCATCGCT
TTATGCAGCTTTTACATCATGCAAATTGAATCAATGAATATATTAATTAGAATATCCTCA
AATTAGCACTCTTCATAAGTGACTTTTGAAAGCCAGCCAAGTCATTGGCCAAACACTTTA
TGAACATATAACTTTCCAGTCTAGATTCAAGGAAGTTTAACTTTCAAATCTGGGTTCAGG
AAGTTAAGGTTTGTTTCCAATGTGCTGTTTTCTAACACTTACCAAATGTGCCACTAAGGA
AGTATACCAAAGAAGATTAAGATGTTATAGTTCATCGAGTATTTATTGAGTATTTATTAT
TGTGCCTGGCACTGTCTGGACCAAAATTAGTAGACTCTAGATATGTCGCCATCAGTGATG
CTGGTTTAGAGCCTCAGATCATCCCAGAATTGTAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAATTCCACCATACTGCGTCCCTTTCACAAATTGCAGAAAGCATTGAATTATCTGAGAA
ATGTGCAGAAGAGGTACCAGGGGACATGCCAAAGATTCTCCTGCATCTTCAGGACCTCTC
TGTAAAGTGCGACGACACGGCTCATTTCCTCTGTGTTTTAGAAGATGAGTCTTTTGTTGA
TGTAACCTGGACTTATGAAGGTGTAACAATAGAGAAATCTAAGAGAGTGAAGCAGTCACA
AAACCATATATAATGTTCAATTCAATTTCTTACCATATATATGTTCAACTGGTAGACCAA
GGATTGTACAGCTGCATCGTACACAATGAGCATGGAGAGAAGACAACGTCAGCAGTTCTA
AGAGTAGAAGGTGGTTATTTGATTTTTAGCTGTGACTTGCTTCATTTCATCCTCATCGCT
TTATGCAGCTTTTACATCATGCAAATTGAATCAATGAATATATTAATTAGAATATCCTCA
AATTAGCACTCTTCATAAGTGACTTTTGAAAGCCAGCCAAGTCATTGGCCAAACACTTTA
TGAACATATAACTTTCCAGTCTAGATTCAAGGAAGTTTAACTTTCAAATCTGGGTTCAGG
AAGTTAAGGTTTGTTTCCAATGTGCTGTTTTCTAACACTTACCAAATGTGCCACTAAGGA
AGTATACCAAAGAAGATTAAGATGTTATAGTTCATCGAGTATTTATTGAGTATTTATTAT
TGTGCCTGGCACTGTCTGGACCAAAATTAGTAGACTCTAGATATGTCGCCATCAGTGATG
CTGGTTTAGAGCCTCAGATCATCCCAGAATTGTAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-815, gnl|bosTau2|chr2 (7655881-7656661)
               

               
               5-815, gnl|Hg17|chr2 (179446815-179445550)
               

               
               5-815, gnl|Mm7|chr2 (76768444-76767521)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-815, gnl|bosTau2|chr2 (7655881-7656661)
               

               
               5-815, gnl|Hg17|chr2 (179446815-179445550)
               

               
               5-815, gnl|Mm7|chr2 (76768444-76767521)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.194005)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.194005)

	5-815, gnl\|bosTau2\|chr2 (7655881-7656661)
	5-815, gnl\|Hg17\|chr2 (179446815-179445550)
	5-815, gnl\|Mm7\|chr2 (76768444-76767521)