Ss1.1-rpldo0125_f2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTTGAAGTGATGGCGACTGGGACCCCAGATTCGCAAGCACGATTTGGTCAGTCCGTGAA GGGGCTTCTCACAGAGAAGGTGAACACCTGTGGTACTGACGTGATTGCGCTCACCAAGCA GGTGCTGAAGGGCTCCCGGAGCTCTGAGCTGTTAGGTCAGGCAGCTCGAAACATGGTACT ACAGGAAGATGCCATCTTGCACTCAGAGGATAGTTTAAGGAAAATGGCCATAATAACAAC ACATCTTCAATACCAGCAAGAAGCTATTCAGAAGAACGTTGAGCAATCATCAAATCTACA GGACCAGTTGAATCACCTCTTGAAATAGAACAGCTTACAAGGGGGCAAAGGCACTTCTTC ACCTGACACTGAGGAGGAGATATCTTACATAATTATTGTGCTGTGGGTTTGATTTTCCCT TTTCTTCTCCGAACGTTATGTTAGAAAAGAATCTGTGAAGATGAATAGTTTCTCCTGAAA GAAAGCTAGGTGATTGAATTTCAGAAGCACTTCTTGAATCAGATCTACCCAGTCTCTTAT TGAATTTTTAAGTTGCCTTTCTTGATGTTAAAGCAGAATTAAAAGATGTCTTACCATGGA CATCCCATAGACTCTTAGTATGTCAAAAGTCACATTATCTAAATGTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTTGAAGTGATGGCGACTGGGACCCCAGATTCGCAAGCACGATTTGGTCAGTCCGTGAA GGGGCTTCTCACAGAGAAGGTGAACACCTGTGGTACTGACGTGATTGCGCTCACCAAGCA GGTGCTGAAGGGCTCCCGGAGCTCTGAGCTGTTAGGTCAGGCAGCTCGAAACATGGTACT ACAGGAAGATGCCATCTTGCACTCAGAGGATAGTTTAAGGAAAATGGCCATAATAACAAC ACATCTTCAATACCAGCAAGAAGCTATTCAGAAGAACGTTGAGCAATCATCAAATCTACA GGACCAGTTGAATCACCTCTTGAAATAGAACAGCTTACAAGGGGGCAAAGGCACTTCTTC ACCTGACACTGAGGAGGAGATATCTTACATAATTATTGTGCTGTGGGTTTGATTTTCCCT TTTCTTCTCCGAACGTTATGTTAGAAAAGAATCTGTGAAGATGAATAGTTTCTCCTGAAA GAAAGCTAGGTGATTGAATTTCAGAAGCACTTCTTGAATCAGATCTACCCAGTCTCTTAT TGAATTTTTAAGTTGCCTTTCTTGATGTTAAAGCAGAATTAAAAGATGTCTTACCATGGA CATCCCATAGACTCTTAGTATGTCAAAAGTCACATTATCTAAATGTTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 5-148, gnl|bosTau2|chr26 (15410179-15410322) | |
| 5-148, gnl|canFam2|chr28 (18314454-18314609) | |
| 5-148, gnl|danRer3|chr13 (28987907-28987765) | |
| 5-148, gnl|dasNov1|scaffold_3475 (76299-76455) | |
| 5-148, gnl|echTel1|scaffold_293300 (69589-69744) | |
| 5-148, gnl|fr1|chrUn (172849875-172850018) | |
| 5-148, gnl|galGal2|chr6 (22457193-22457346) | |
| 5-148, gnl|hg17|chr10 (104604028-104604183) | |
| 5-148, gnl|Hg17|chr10 (104604031-104604174) | |
| 5-148, gnl|loxAfr1|scaffold_19068 (49139-48984) | |
| 5-148, gnl|mm7|chr19 (46586575-46586730) | |
| 5-148, gnl|Mm7|chr19 (46586578-46586721) | |
| 5-148, gnl|monDom2|scaffold_14 (60451428-60451273) | |
| 5-148, gnl|oryCun1|scaffold_207366 (55603-55758) | |
| 5-148, gnl|panTro1|chr8 (106366785-106366940) | |
| 5-148, gnl|rheMac2|chr9 (102535597-102535752) | |
| 5-148, gnl|rn3|chr1 (252257508-252257663) | |
| 5-148, gnl|tetNig1|chrUn_random (53902788-53902641) | |
| 277-646, gnl|bosTau2|chr26 (15421848-15422214) | |
| 277-646, gnl|Hg17|chr10 (104612620-104613309) | |
| 376-506, gnl|bosTau2|chr10 (3289352-3289480) | |
| 376-506, gnl|Hg17|chr10 (104612719-104613168) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-148, gnl|bosTau2|chr26 (15410179-15410322) | |
| 5-148, gnl|canFam2|chr28 (18314454-18314609) | |
| 5-148, gnl|danRer3|chr13 (28987907-28987765) | |
| 5-148, gnl|dasNov1|scaffold_3475 (76299-76455) | |
| 5-148, gnl|echTel1|scaffold_293300 (69589-69744) | |
| 5-148, gnl|fr1|chrUn (172849875-172850018) | |
| 5-148, gnl|galGal2|chr6 (22457193-22457346) | |
| 5-148, gnl|hg17|chr10 (104604028-104604183) | |
| 5-148, gnl|Hg17|chr10 (104604031-104604174) | |
| 5-148, gnl|loxAfr1|scaffold_19068 (49139-48984) | |
| 5-148, gnl|mm7|chr19 (46586575-46586730) | |
| 5-148, gnl|Mm7|chr19 (46586578-46586721) | |
| 5-148, gnl|monDom2|scaffold_14 (60451428-60451273) | |
| 5-148, gnl|oryCun1|scaffold_207366 (55603-55758) | |
| 5-148, gnl|panTro1|chr8 (106366785-106366940) | |
| 5-148, gnl|rheMac2|chr9 (102535597-102535752) | |
| 5-148, gnl|rn3|chr1 (252257508-252257663) | |
| 5-148, gnl|tetNig1|chrUn_random (53902788-53902641) | |
| 277-646, gnl|bosTau2|chr26 (15421848-15422214) | |
| 277-646, gnl|Hg17|chr10 (104612620-104613309) | |
| 376-506, gnl|bosTau2|chr10 (3289352-3289480) | |
| 376-506, gnl|Hg17|chr10 (104612719-104613168) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| nms (0.213858) | |
| fty (0.17584) | |
| lin (0.145603) | |
| pla (0.133672) | |
| nmm (0.132802) | |
| ldo (0.0970026) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nms (0.213858) | |
| fty (0.17584) | |
| lin (0.145603) | |
| pla (0.133672) | |
| nmm (0.132802) | |
| ldo (0.0970026) |