Ss1.1-rpldo0125_j22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTAAAGAAGAAGAAGGAAGCAGAGGAAGTCGGGGTGACTGCTGAGAAAACTGCACAGCCC ACCAACAGCTGATGAAATTAGTGAACAAGCAAATCAACCATGTCTTACACTCCAGGAATT GGTGGTGACCCAGCCCAGCTGGCCCAGCGTATCTCTTCCAACATCCAGAAGATCACACAA TGTTCCGTGGAAATACAAAGGACTCTGAATCAACTTGGAACACCTCAAGATACACCTGAA TTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACGAACCAACTTGCCAAAGAAACAGAC AAGTACATTAAAGAATTTGGATCTCTGCCCACTACCCCCAGTGAACAGCGTCAAAGGAAA ATACAGAAAGACCGCTTAGTGGCTGAATTCACAACGTCACTGACAAACTTTCAGAAGGTG CAGAGGCAAGCTGCTGAGAAAGAGAAAGAATTTGTTGCTCGAGTAAGAGCCAGTTCCAGA GTTTCTGGTGGTTTTCCTGAGGAGACCTCAAAAGAAAGAAATCTTGTATCCTGGGAAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTAAAGAAGAAGAAGGAAGCAGAGGAAGTCGGGGTGACTGCTGAGAAAACTGCACAGCCC ACCAACAGCTGATGAAATTAGTGAACAAGCAAATCAACCATGTCTTACACTCCAGGAATT GGTGGTGACCCAGCCCAGCTGGCCCAGCGTATCTCTTCCAACATCCAGAAGATCACACAA TGTTCCGTGGAAATACAAAGGACTCTGAATCAACTTGGAACACCTCAAGATACACCTGAA TTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACGAACCAACTTGCCAAAGAAACAGAC AAGTACATTAAAGAATTTGGATCTCTGCCCACTACCCCCAGTGAACAGCGTCAAAGGAAA ATACAGAAAGACCGCTTAGTGGCTGAATTCACAACGTCACTGACAAACTTTCAGAAGGTG CAGAGGCAAGCTGCTGAGAAAGAGAAAGAATTTGTTGCTCGAGTAAGAGCCAGTTCCAGA GTTTCTGGTGGTTTTCCTGAGGAGACCTCAAAAGAAAGAAATCTTGTATCCTGGGAAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 33-182, gnl|bosTau2|chr9 (40420161-40420012) | |
| 33-182, gnl|Hg17|chr6 (132866421-132866280) | |
| 33-182, gnl|Mm7|chr10 (23906161-23906309) | |
| 347-487, gnl|bosTau2|chr9 (40387214-40387074) | |
| 347-487, gnl|canFam2|chr1 (28607277-28607450) | |
| 347-487, gnl|danRer3|chr20 (52677227-52677399) | |
| 347-487, gnl|dasNov1|scaffold_43240 (7726-7551) | |
| 347-487, gnl|echTel1|scaffold_317149 (60095-59917) | |
| 347-487, gnl|fr1|chrUn (156756488-156756332) | |
| 347-487, gnl|galGal2|chrUn (10076781-10076953) | |
| 347-487, gnl|hg17|chr6 (132834274-132834451) | |
| 347-487, gnl|Hg17|chr6 (132834434-132834294) | |
| 347-487, gnl|loxAfr1|scaffold_7646 (54756-54580) | |
| 347-487, gnl|mm7|chr10 (23931009-23930838) | |
| 347-487, gnl|Mm7|chr10 (23930851-23930991) | |
| 347-487, gnl|monDom2|scaffold_0 (79135175-79135000) | |
| 347-487, gnl|oryCun1|scaffold_105799 (2391-2216) | |
| 347-487, gnl|panTro1|chr5 (135479356-135479533) | |
| 347-487, gnl|rheMac2|chr4 (131423674-131423497) | |
| 347-487, gnl|rn3|chr1 (21735433-21735608) | |
| 347-487, gnl|tetNig1|chr14 (6631565-6631726) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 33-182, gnl|bosTau2|chr9 (40420161-40420012) | |
| 33-182, gnl|Hg17|chr6 (132866421-132866280) | |
| 33-182, gnl|Mm7|chr10 (23906161-23906309) | |
| 347-487, gnl|bosTau2|chr9 (40387214-40387074) | |
| 347-487, gnl|canFam2|chr1 (28607277-28607450) | |
| 347-487, gnl|danRer3|chr20 (52677227-52677399) | |
| 347-487, gnl|dasNov1|scaffold_43240 (7726-7551) | |
| 347-487, gnl|echTel1|scaffold_317149 (60095-59917) | |
| 347-487, gnl|fr1|chrUn (156756488-156756332) | |
| 347-487, gnl|galGal2|chrUn (10076781-10076953) | |
| 347-487, gnl|hg17|chr6 (132834274-132834451) | |
| 347-487, gnl|Hg17|chr6 (132834434-132834294) | |
| 347-487, gnl|loxAfr1|scaffold_7646 (54756-54580) | |
| 347-487, gnl|mm7|chr10 (23931009-23930838) | |
| 347-487, gnl|Mm7|chr10 (23930851-23930991) | |
| 347-487, gnl|monDom2|scaffold_0 (79135175-79135000) | |
| 347-487, gnl|oryCun1|scaffold_105799 (2391-2216) | |
| 347-487, gnl|panTro1|chr5 (135479356-135479533) | |
| 347-487, gnl|rheMac2|chr4 (131423674-131423497) | |
| 347-487, gnl|rn3|chr1 (21735433-21735608) | |
| 347-487, gnl|tetNig1|chr14 (6631565-6631726) |
| Expressed library(ies): 9 entry(ies) | More info |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
| fce (0.271592) | |
| cje (0.165235) | |
| csk (0.140746) | |
| cst (0.140036) | |
| ste (0.135208) | |
| bla (0.124347) | |
| eru (0.120048) | |
| jej (0.0989218) | |
| ldo (0.0970026) |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| cje (0.165235) | |
| csk (0.140746) | |
| cst (0.140036) | |
| ste (0.135208) | |
| bla (0.124347) | |
| eru (0.120048) | |
| jej (0.0989218) | |
| ldo (0.0970026) |