Non-Coding RNA Search

Ss1.1-rpldo0128_j24.5S

Sequence:


               
               TCTGGCAATTCAGCAGCCTCTTCTCCAAAATCAAGAGCTGGGAGTTTAATGAAGTTGCCT
CCATGTCTGAGCACCTGAAGTCCTGTCCTTTCAACATTGTAGAGCACAAGACTGACCCGA
TTCTTTTGACCAGCATGTGTCAGCCCCATGAGCAGGCCCGAGAGACCTTAGTCTCCACCT
TCAGAGCCAGAACACGAGGAAGACACGCCTACTAAAGATTCAGAGGTCACCATTCTTGAT
TCCCACTCAGAGTTACTGAAAGTCGGACAGAGTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGGCAATTCAGCAGCCTCTTCTCCAAAATCAAGAGCTGGGAGTTTAATGAAGTTGCCT
CCATGTCTGAGCACCTGAAGTCCTGTCCTTTCAACATTGTAGAGCACAAGACTGACCCGA
TTCTTTTGACCAGCATGTGTCAGCCCCATGAGCAGGCCCGAGAGACCTTAGTCTCCACCT
TCAGAGCCAGAACACGAGGAAGACACGCCTACTAAAGATTCAGAGGTCACCATTCTTGAT
TCCCACTCAGAGTTACTGAAAGTCGGACAGAGTGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|50798293|ref|XP_424000.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|50798293|ref|XP_424000.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-276, gnl|bosTau2|chr1 (40275613-40275337)
               

               
               3-276, gnl|Hg17|chr3 (122828235-122828519)
               

               
               3-276, gnl|Mm7|chr16 (36674661-36674397)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-276, gnl|bosTau2|chr1 (40275613-40275337)
               

               
               3-276, gnl|Hg17|chr3 (122828235-122828519)
               

               
               3-276, gnl|Mm7|chr16 (36674661-36674397)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ssp (0.13552)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)
               

               
               ldo (0.0970026)

	3-276, gnl\|bosTau2\|chr1 (40275613-40275337)
	3-276, gnl\|Hg17\|chr3 (122828235-122828519)
	3-276, gnl\|Mm7\|chr16 (36674661-36674397)