Ss1.1-rpldo0130_j7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAATCAGCCCACTCTCTTCATATCCACAAACTCTGGAGCATCTGCTGCTGCCAGGAATAT GTCTGGGCAAGTGAGCATGGGTCCTGCCTTTATTCATCACCACCCTCCCAAAAGTCGAGC AATAGGCAGTAACTCTGCAACTTCTCCTCGAGTGGTGGTCACTCAACCCAATACAAAATA TACTTTCAAAATTACAGTTTCTCCCAATAAACCCCCTGCAGTTTCACCAGGGGTAGTGTC CCCTACCTTTGAACTTACAAATCTTCTAAACCATCCTGATCATTATGTAGAAACAGAAAA TATTCAGCACCTCACGGACCCTACTTTAGCACATGTGGATAGAATAAGTGAAGCACGGAA GTTGAGTATGGGATCTGATGATGCTGCCTACACACAAGCTCTTTTGGTACATCAGAAGGC CAGAATGGAACGACTTCAAAGAGAACTTGAGATTCAAAAGAAAAAGCTGGATAAACTAAA ATCTGAGGTCAATGAAATGGAAAATAATTTAACTCGAAGGCGTCTGAAAAGATCAAATTC CATATCCCAAATACCTTCACTCGAAGAAATGCAGCAGTTGAGAAGTTGTAATAGACAACT CCAGATTGACATTGACTGCTTAACCAAAGAAATTGATCTTTTTCAAGCCCGAGGACCACA TTTTAATCCCAGCGCTATTCATAACTTTTATGACAATATTGGATTTGTAGGTCCTGTGCC ACCAAAACCCAAAGATCAAAGGTCCTCCATCAAAACCCCAAAGTCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAATCAGCCCACTCTCTTCATATCCACAAACTCTGGAGCATCTGCTGCTGCCAGGAATAT GTCTGGGCAAGTGAGCATGGGTCCTGCCTTTATTCATCACCACCCTCCCAAAAGTCGAGC AATAGGCAGTAACTCTGCAACTTCTCCTCGAGTGGTGGTCACTCAACCCAATACAAAATA TACTTTCAAAATTACAGTTTCTCCCAATAAACCCCCTGCAGTTTCACCAGGGGTAGTGTC CCCTACCTTTGAACTTACAAATCTTCTAAACCATCCTGATCATTATGTAGAAACAGAAAA TATTCAGCACCTCACGGACCCTACTTTAGCACATGTGGATAGAATAAGTGAAGCACGGAA GTTGAGTATGGGATCTGATGATGCTGCCTACACACAAGCTCTTTTGGTACATCAGAAGGC CAGAATGGAACGACTTCAAAGAGAACTTGAGATTCAAAAGAAAAAGCTGGATAAACTAAA ATCTGAGGTCAATGAAATGGAAAATAATTTAACTCGAAGGCGTCTGAAAAGATCAAATTC CATATCCCAAATACCTTCACTCGAAGAAATGCAGCAGTTGAGAAGTTGTAATAGACAACT CCAGATTGACATTGACTGCTTAACCAAAGAAATTGATCTTTTTCAAGCCCGAGGACCACA TTTTAATCCCAGCGCTATTCATAACTTTTATGACAATATTGGATTTGTAGGTCCTGTGCC ACCAAAACCCAAAGATCAAAGGTCCTCCATCAAAACCCCAAAGTCTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 2-398, gnl|bosTau2|chr23 (25076781-25077177) | |
| 2-398, gnl|canFam2|chr1 (43221011-43221467) | |
| 2-398, gnl|canFam2|chr1 (43220928-43221439) | |
| 2-398, gnl|danRer3|chr20 (1747184-1747779) | |
| 2-398, gnl|dasNov1|scaffold_16283 (1662-1069) | |
| 2-398, gnl|dasNov1|scaffold_67465 (3165-2746) | |
| 2-398, gnl|echTel1|scaffold_296111 (39211-39664) | |
| 2-398, gnl|echTel1|scaffold_296111 (39128-39636) | |
| 2-398, gnl|fr1|chrUn (270653549-270654102) | |
| 2-398, gnl|galGal2|chr3 (47038061-47038520) | |
| 2-398, gnl|galGal2|chr3 (47037978-47038492) | |
| 2-398, gnl|hg17|chr1 (245197541-245197989) | |
| 2-398, gnl|hg17|chr6 (149741780-149742291) | |
| 2-398, gnl|Hg17|chr6 (149741951-149742347) | |
| 2-398, gnl|loxAfr1|scaffold_32017 (28638-29100) | |
| 2-398, gnl|mm7|chr10 (7619848-7619392) | |
| 2-398, gnl|mm7|chr10 (7619931-7619420) | |
| 2-398, gnl|Mm7|chr10 (7619758-7619362) | |
| 2-398, gnl|monDom2|scaffold_0 (56660332-56659873) | |
| 2-398, gnl|monDom2|scaffold_0 (56660415-56659901) | |
| 2-398, gnl|oryCun1|scaffold_214483 (9763-9307) | |
| 2-398, gnl|oryCun1|scaffold_214483 (9846-9335) | |
| 2-398, gnl|panTro1|chr1_random (55339528-55339977) | |
| 2-398, gnl|panTro1|chr5 (153197403-153197914) | |
| 2-398, gnl|rheMac2|chr1 (207972929-207972493) | |
| 2-398, gnl|rheMac2|chr4 (113916253-113915742) | |
| 2-398, gnl|rn3|chr1 (2582101-2581636) | |
| 2-398, gnl|rn3|chr1 (2582175-2581664) | |
| 2-398, gnl|tetNig1|chrUn_random (83822226-83822778) | |
| 2-398, gnl|xenTro1|scaffold_986 (120645-121111) | |
| 2-398, gnl|xenTro1|scaffold_986 (120581-121083) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-398, gnl|bosTau2|chr23 (25076781-25077177) | |
| 2-398, gnl|canFam2|chr1 (43221011-43221467) | |
| 2-398, gnl|canFam2|chr1 (43220928-43221439) | |
| 2-398, gnl|danRer3|chr20 (1747184-1747779) | |
| 2-398, gnl|dasNov1|scaffold_16283 (1662-1069) | |
| 2-398, gnl|dasNov1|scaffold_67465 (3165-2746) | |
| 2-398, gnl|echTel1|scaffold_296111 (39211-39664) | |
| 2-398, gnl|echTel1|scaffold_296111 (39128-39636) | |
| 2-398, gnl|fr1|chrUn (270653549-270654102) | |
| 2-398, gnl|galGal2|chr3 (47038061-47038520) | |
| 2-398, gnl|galGal2|chr3 (47037978-47038492) | |
| 2-398, gnl|hg17|chr1 (245197541-245197989) | |
| 2-398, gnl|hg17|chr6 (149741780-149742291) | |
| 2-398, gnl|Hg17|chr6 (149741951-149742347) | |
| 2-398, gnl|loxAfr1|scaffold_32017 (28638-29100) | |
| 2-398, gnl|mm7|chr10 (7619848-7619392) | |
| 2-398, gnl|mm7|chr10 (7619931-7619420) | |
| 2-398, gnl|Mm7|chr10 (7619758-7619362) | |
| 2-398, gnl|monDom2|scaffold_0 (56660332-56659873) | |
| 2-398, gnl|monDom2|scaffold_0 (56660415-56659901) | |
| 2-398, gnl|oryCun1|scaffold_214483 (9763-9307) | |
| 2-398, gnl|oryCun1|scaffold_214483 (9846-9335) | |
| 2-398, gnl|panTro1|chr1_random (55339528-55339977) | |
| 2-398, gnl|panTro1|chr5 (153197403-153197914) | |
| 2-398, gnl|rheMac2|chr1 (207972929-207972493) | |
| 2-398, gnl|rheMac2|chr4 (113916253-113915742) | |
| 2-398, gnl|rn3|chr1 (2582101-2581636) | |
| 2-398, gnl|rn3|chr1 (2582175-2581664) | |
| 2-398, gnl|tetNig1|chrUn_random (83822226-83822778) | |
| 2-398, gnl|xenTro1|scaffold_986 (120645-121111) | |
| 2-398, gnl|xenTro1|scaffold_986 (120581-121083) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ldo (0.194005) | |
| ton (0.1755) | |
| isp (0.150376) |