Ss1.1-rpldo0135_c14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCGGCTTTAAGCGCTGGTGCCGCCGCTCCCCGCGGCCTGGCTGGGCGGAATGAATGTGA TAGACCACGTGCGAGACATGGCGGCCGCGGGGCTGCACTCCAATGTGCGGCTCCTTAGCA GCTTGTTACTCACAATGAGTAATAACAACCCTGAGTTATTCTCCCCATCTCAGAAGTATC AGCTTTTGGTGTATCATGCAGATTCTCTCTTTCATGATAAGGAATATCGGAATGCCGTGA GTAAATATACCATGGCTTTACAGCAGAAGAAAGCCCTAAGCAAAACTTCGAAAGTAAGAC CTTCAACTGGAAATTCTGCATCTACTCCTCAAAGTCAGATAAACATGATGCTGGCAAACC TGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAGTCACCAGCTATAAGGAAGTACTGAGGC AGTGCCCATTAGCCCTTGATGCCATTCTAGGTTTGCTGTCCCTTTCTGTAAAAGGTGCAG AGGTAGCATCGATGACGATGAACGTGATACAGACCGTGCCTAACTTGGATGGGCTTTCTG TGTGGATCAAAGCCTATGCTTTGGTACACACTGGTGACAACTCAAGAGCGATTAATACCA TCTGTTCACTAGAGAAAAAGTCCTTATTGAGAGATAACGTGGACCTCCTGGGAAGCTTAG CAGATCTGTACTTCAGAGCTGGAGACAACAAAAACTCTGTCCTCAAGTTGGAACAGGCAC AGATGTGGGATCCTTATCTGATAAAAGGAATGGATGTATATGGCTACCTCCTGGCACGAG AAGGGCGGCTGGAAGATGTGGAGAACCTTGGCTGCCGCCTTTTCAATATTTCTGATCAAC ATGCAGAACCTTGGGTGGTCTCTGGGTGTCATAGCTTCTATAGCAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCGGCTTTAAGCGCTGGTGCCGCCGCTCCCCGCGGCCTGGCTGGGCGGAATGAATGTGA TAGACCACGTGCGAGACATGGCGGCCGCGGGGCTGCACTCCAATGTGCGGCTCCTTAGCA GCTTGTTACTCACAATGAGTAATAACAACCCTGAGTTATTCTCCCCATCTCAGAAGTATC AGCTTTTGGTGTATCATGCAGATTCTCTCTTTCATGATAAGGAATATCGGAATGCCGTGA GTAAATATACCATGGCTTTACAGCAGAAGAAAGCCCTAAGCAAAACTTCGAAAGTAAGAC CTTCAACTGGAAATTCTGCATCTACTCCTCAAAGTCAGATAAACATGATGCTGGCAAACC TGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAGTCACCAGCTATAAGGAAGTACTGAGGC AGTGCCCATTAGCCCTTGATGCCATTCTAGGTTTGCTGTCCCTTTCTGTAAAAGGTGCAG AGGTAGCATCGATGACGATGAACGTGATACAGACCGTGCCTAACTTGGATGGGCTTTCTG TGTGGATCAAAGCCTATGCTTTGGTACACACTGGTGACAACTCAAGAGCGATTAATACCA TCTGTTCACTAGAGAAAAAGTCCTTATTGAGAGATAACGTGGACCTCCTGGGAAGCTTAG CAGATCTGTACTTCAGAGCTGGAGACAACAAAAACTCTGTCCTCAAGTTGGAACAGGCAC AGATGTGGGATCCTTATCTGATAAAAGGAATGGATGTATATGGCTACCTCCTGGCACGAG AAGGGCGGCTGGAAGATGTGGAGAACCTTGGCTGCCGCCTTTTCAATATTTCTGATCAAC ATGCAGAACCTTGGGTGGTCTCTGGGTGTCATAGCTTCTATAGCAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 152-342, gnl|bosTau2|chr17 (30299148-30299338) | |
| 152-342, gnl|canFam2|chr26 (11261508-11261669) | |
| 152-342, gnl|danRer3|chr8 (3993477-3993628) | |
| 152-342, gnl|dasNov1|scaffold_3577 (60885-61026) | |
| 152-342, gnl|echTel1|scaffold_299340 (37877-38037) | |
| 152-342, gnl|fr1|chrUn (56450736-56450904) | |
| 152-342, gnl|galGal2|chr15 (5242875-5242714) | |
| 152-342, gnl|hg17|chr12 (109296775-109296936) | |
| 152-342, gnl|Hg17|chr12 (109296977-109296787) | |
| 152-342, gnl|loxAfr1|scaffold_139102 (781-627) | |
| 152-342, gnl|mm7|chr5 (121662557-121662396) | |
| 152-342, gnl|Mm7|chr5 (121662353-121662543) | |
| 152-342, gnl|monDom2|scaffold_97 (950421-950266) | |
| 152-342, gnl|oryCun1|scaffold_197898 (6473-6312) | |
| 152-342, gnl|rheMac2|chr11 (111310357-111310518) | |
| 152-342, gnl|rn3|chr12 (35212856-35213015) | |
| 152-342, gnl|tetNig1|chr12 (11609565-11609722) | |
| 152-342, gnl|xenTro1|scaffold_501 (524811-524664) | |
| 604-748, gnl|bosTau2|chr17 (30306029-30306173) | |
| 604-748, gnl|Hg17|chr12 (109286995-109286851) | |
| 604-748, gnl|Mm7|chr5 (121669740-121669884) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 152-342, gnl|bosTau2|chr17 (30299148-30299338) | |
| 152-342, gnl|canFam2|chr26 (11261508-11261669) | |
| 152-342, gnl|danRer3|chr8 (3993477-3993628) | |
| 152-342, gnl|dasNov1|scaffold_3577 (60885-61026) | |
| 152-342, gnl|echTel1|scaffold_299340 (37877-38037) | |
| 152-342, gnl|fr1|chrUn (56450736-56450904) | |
| 152-342, gnl|galGal2|chr15 (5242875-5242714) | |
| 152-342, gnl|hg17|chr12 (109296775-109296936) | |
| 152-342, gnl|Hg17|chr12 (109296977-109296787) | |
| 152-342, gnl|loxAfr1|scaffold_139102 (781-627) | |
| 152-342, gnl|mm7|chr5 (121662557-121662396) | |
| 152-342, gnl|Mm7|chr5 (121662353-121662543) | |
| 152-342, gnl|monDom2|scaffold_97 (950421-950266) | |
| 152-342, gnl|oryCun1|scaffold_197898 (6473-6312) | |
| 152-342, gnl|rheMac2|chr11 (111310357-111310518) | |
| 152-342, gnl|rn3|chr12 (35212856-35213015) | |
| 152-342, gnl|tetNig1|chr12 (11609565-11609722) | |
| 152-342, gnl|xenTro1|scaffold_501 (524811-524664) | |
| 604-748, gnl|bosTau2|chr17 (30306029-30306173) | |
| 604-748, gnl|Hg17|chr12 (109286995-109286851) | |
| 604-748, gnl|Mm7|chr5 (121669740-121669884) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.115035) | |
| jej (0.0989218) | |
| ldo (0.0970026) |