Ss1.1-rpldo0138_f7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGACCTTTTAGCACAGCAGCATTCCCTGAAAGCTCAAAAACAGCAGCAGGAACGGGTCG CCGCTACCGTGACAGGACAGATGTCAGACAGAGCTGCAGGCGGCTCGCCCAATGAATGGC AAGATATCGATCTGGAGGAGCTGGCGAGTCTGGAAAGCGACCTTTTAGCACAGCAGCATT CCCTGAAAGCTCAAAAACAGCAGCAGGAACGGGTGGCCGCTACCGTGACAGGACAGATGT TTCTCGAAAGCCAGGAGCTGCTCCGCCTGTTCGGCGTCCCCTACATCGAGGCTCCCATGG AAGCAGAGGCTCAGTGCGCCATCCTGGACCTGAGCGATCAAACGTCCGGAACCATCACTG ATGACAGTGACATCTGGCTGTTCGGAGCACGGCACGTCTATAAAAACTTCTTCAATAAAA ACAAGTTTGTAGAGTATTACCAGTACGTGGACTTCCATAGCCAACTAGGATTGGACCGGA ACAAATTAATAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGACCTTTTAGCACAGCAGCATTCCCTGAAAGCTCAAAAACAGCAGCAGGAACGGGTCG CCGCTACCGTGACAGGACAGATGTCAGACAGAGCTGCAGGCGGCTCGCCCAATGAATGGC AAGATATCGATCTGGAGGAGCTGGCGAGTCTGGAAAGCGACCTTTTAGCACAGCAGCATT CCCTGAAAGCTCAAAAACAGCAGCAGGAACGGGTGGCCGCTACCGTGACAGGACAGATGT TTCTCGAAAGCCAGGAGCTGCTCCGCCTGTTCGGCGTCCCCTACATCGAGGCTCCCATGG AAGCAGAGGCTCAGTGCGCCATCCTGGACCTGAGCGATCAAACGTCCGGAACCATCACTG ATGACAGTGACATCTGGCTGTTCGGAGCACGGCACGTCTATAAAAACTTCTTCAATAAAA ACAAGTTTGTAGAGTATTACCAGTACGTGGACTTCCATAGCCAACTAGGATTGGACCGGA ACAAATTAATAA |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 252-469, gnl|bosTau2|chr12 (42377850-42378067) | |
| 252-469, gnl|canFam2|chr22 (55309484-55309698) | |
| 252-469, gnl|danRer3|chrUn (104959194-104958984) | |
| 252-469, gnl|dasNov1|scaffold_97258 (3365-3151) | |
| 252-469, gnl|echTel1|scaffold_293077 (8304-8093) | |
| 252-469, gnl|fr1|chrUn (216084492-216084286) | |
| 252-469, gnl|galGal2|chr1 (135449521-135449310) | |
| 252-469, gnl|hg17|chr13 (102316955-102317170) | |
| 252-469, gnl|Hg17|chr13 (102316980-102317197) | |
| 252-469, gnl|loxAfr1|scaffold_84 (11044-10827) | |
| 252-469, gnl|mm7|chr1 (44414528-44414736) | |
| 252-469, gnl|Mm7|chr1 (44414546-44414763) | |
| 252-469, gnl|monDom2|scaffold_11 (48194674-48194465) | |
| 252-469, gnl|oryCun1|scaffold_186108 (61783-61589) | |
| 252-469, gnl|panTro1|chr14 (85708964-85709179) | |
| 252-469, gnl|rheMac2|chr17 (83163351-83163563) | |
| 252-469, gnl|rn3|chr9 (43279550-43279756) | |
| 252-469, gnl|tetNig1|chr5 (8182995-8183206) | |
| 252-469, gnl|xenTro1|scaffold_77 (2420115-2420303) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 252-469, gnl|bosTau2|chr12 (42377850-42378067) | |
| 252-469, gnl|canFam2|chr22 (55309484-55309698) | |
| 252-469, gnl|danRer3|chrUn (104959194-104958984) | |
| 252-469, gnl|dasNov1|scaffold_97258 (3365-3151) | |
| 252-469, gnl|echTel1|scaffold_293077 (8304-8093) | |
| 252-469, gnl|fr1|chrUn (216084492-216084286) | |
| 252-469, gnl|galGal2|chr1 (135449521-135449310) | |
| 252-469, gnl|hg17|chr13 (102316955-102317170) | |
| 252-469, gnl|Hg17|chr13 (102316980-102317197) | |
| 252-469, gnl|loxAfr1|scaffold_84 (11044-10827) | |
| 252-469, gnl|mm7|chr1 (44414528-44414736) | |
| 252-469, gnl|Mm7|chr1 (44414546-44414763) | |
| 252-469, gnl|monDom2|scaffold_11 (48194674-48194465) | |
| 252-469, gnl|oryCun1|scaffold_186108 (61783-61589) | |
| 252-469, gnl|panTro1|chr14 (85708964-85709179) | |
| 252-469, gnl|rheMac2|chr17 (83163351-83163563) | |
| 252-469, gnl|rn3|chr9 (43279550-43279756) | |
| 252-469, gnl|tetNig1|chr5 (8182995-8183206) | |
| 252-469, gnl|xenTro1|scaffold_77 (2420115-2420303) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.245128) | |
| ldo (0.0970026) |