Ss1.1-rpliv0107_d17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTCTGCAGAATATGTTAAAGCTCATACCTAGTTCATTAGGAGTGTCTGTCGGAAGATAT GATTCTGCCCCTCACCACAGCCCCGTCTCTCTCTTCAGCGGCATATGGAGAAATCTAGAT TTGTGACATTATTTCTAAGTGGGAACAGGCTTCCAAAGAGCAGCAGCCTGGAAAATGGGA AGGTACGAGAACTGTTCGTCTCACTTATAAAAACAGACTGTATTTCTCAATGCAAGCTCA TGGAGAGACTGATAGAGAAAAACTGCTGCTAATGTATCAGACAAATGATCAAATAATAAA TGGACTCTTTCCTCTGAACAGAGACCTGGCATTAGAAATGGCGGCTCTTTTAGCGCAGGT GGAGATTGGAGATTTTGAAAGACCTTTTTCCACTCCAGCAGGTCATGTCACTAATCAGTG CAAAGCAAATCAAACTCTCAAACAAGTCATCGAGAAATTTTACCCCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTCTGCAGAATATGTTAAAGCTCATACCTAGTTCATTAGGAGTGTCTGTCGGAAGATAT GATTCTGCCCCTCACCACAGCCCCGTCTCTCTCTTCAGCGGCATATGGAGAAATCTAGAT TTGTGACATTATTTCTAAGTGGGAACAGGCTTCCAAAGAGCAGCAGCCTGGAAAATGGGA AGGTACGAGAACTGTTCGTCTCACTTATAAAAACAGACTGTATTTCTCAATGCAAGCTCA TGGAGAGACTGATAGAGAAAAACTGCTGCTAATGTATCAGACAAATGATCAAATAATAAA TGGACTCTTTCCTCTGAACAGAGACCTGGCATTAGAAATGGCGGCTCTTTTAGCGCAGGT GGAGATTGGAGATTTTGAAAGACCTTTTTCCACTCCAGCAGGTCATGTCACTAATCAGTG CAAAGCAAATCAAACTCTCAAACAAGTCATCGAGAAATTTTACCCCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 213-360, gnl|bosTau2|chr15 (30749829-30749976) | |
| 213-360, gnl|canFam2|chr10 (49336238-49336424) | |
| 213-360, gnl|danRer3|chr16 (17030636-17030454) | |
| 213-360, gnl|dasNov1|scaffold_851 (59958-60139) | |
| 213-360, gnl|echTel1|scaffold_283453 (10299-10097) | |
| 213-360, gnl|fr1|chrUn (157533159-157532977) | |
| 213-360, gnl|galGal2|chr3 (21524606-21524794) | |
| 213-360, gnl|hg17|chr2 (43892391-43892580) | |
| 213-360, gnl|Hg17|chr2 (43892405-43892552) | |
| 213-360, gnl|loxAfr1|scaffold_3557 (11554-11358) | |
| 213-360, gnl|mm7|chr17 (82901248-82901422) | |
| 213-360, gnl|Mm7|chr17 (82901264-82901411) | |
| 213-360, gnl|monDom2|scaffold_1 (2365260-2365435) | |
| 213-360, gnl|oryCun1|scaffold_205399 (43643-43458) | |
| 213-360, gnl|panTro1|chr12_random (18391512-18391323) | |
| 213-360, gnl|rheMac2|chr13 (43855940-43856133) | |
| 213-360, gnl|rn3|chr6 (7968660-7968847) | |
| 213-360, gnl|tetNig1|chrUn_random (139076819-139076658) | |
| 213-360, gnl|xenTro1|scaffold_30 (2294220-2294389) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 213-360, gnl|bosTau2|chr15 (30749829-30749976) | |
| 213-360, gnl|canFam2|chr10 (49336238-49336424) | |
| 213-360, gnl|danRer3|chr16 (17030636-17030454) | |
| 213-360, gnl|dasNov1|scaffold_851 (59958-60139) | |
| 213-360, gnl|echTel1|scaffold_283453 (10299-10097) | |
| 213-360, gnl|fr1|chrUn (157533159-157532977) | |
| 213-360, gnl|galGal2|chr3 (21524606-21524794) | |
| 213-360, gnl|hg17|chr2 (43892391-43892580) | |
| 213-360, gnl|Hg17|chr2 (43892405-43892552) | |
| 213-360, gnl|loxAfr1|scaffold_3557 (11554-11358) | |
| 213-360, gnl|mm7|chr17 (82901248-82901422) | |
| 213-360, gnl|Mm7|chr17 (82901264-82901411) | |
| 213-360, gnl|monDom2|scaffold_1 (2365260-2365435) | |
| 213-360, gnl|oryCun1|scaffold_205399 (43643-43458) | |
| 213-360, gnl|panTro1|chr12_random (18391512-18391323) | |
| 213-360, gnl|rheMac2|chr13 (43855940-43856133) | |
| 213-360, gnl|rn3|chr6 (7968660-7968847) | |
| 213-360, gnl|tetNig1|chrUn_random (139076819-139076658) | |
| 213-360, gnl|xenTro1|scaffold_30 (2294220-2294389) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.146284) |