Non-Coding RNA Search

Ss1.1-rpliv0109_b6.5

Sequence:


               
               AGGTTCGTTACTGCTGAGCCATGATGGGAACTCTGCCTTTTTTATTAGGAAACTTTTAAA
TGTCAGGAAAATAGTGTAATGAAACCCTGCATTATCTCACTCCTATATCAATTCATGGTA
TAGTGTACTTCATTCTTTTCACCCACTATTCTCTCACATAATTTTGAAGCAAATCCTATC
GCCTGTATGTGTTTTATTATAAAGACGAATATTTTTTCTCCCCTTGGACATCTCTTAATC
TCAGCAATAGAACGTGCAGGTGGTTTTGGATTGTGAAAGATTTGAGGGGCTCTTTACCAT
AAGAAGACAGTATTCTTAGAGTTTTTGAGCTTCAGTTTTTGCTGTTGTGATTTAATTTTG
AAAATAGTTGATTTCTTTTAAGCTTGCTAATAGTAAGTATGTGGATTTTCCTTAACATTG
TAGATTTTCTTGGAAACAGAATTGTTCTACAAAGGTATCCGTCCTGCCATTAACGTTGGT
TTGTCTGTATCTCGTGTGGGATCTGCTGCCCAAACCAGGGCCATGAAGCAGGTAATTGAA
TTACTTTGTCTTTAGGTTAAAAATCAAAGTGTATTGTATTGTGGTCCTCAGTGTATGTCA
CTGAGGTTAGGGTTTTTGTATCATCTGAATTAACTATTCCTATATGTCAGGTGGCAGGTA
CCATGAAACTGGAATTGGCTCAGTATCGTGAAGTTGCTGCTTTTGCCCAGTTCGGTTCTG
ACCTGGATGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTTCGTTACTGCTGAGCCATGATGGGAACTCTGCCTTTTTTATTAGGAAACTTTTAAA
TGTCAGGAAAATAGTGTAATGAAACCCTGCATTATCTCACTCCTATATCAATTCATGGTA
TAGTGTACTTCATTCTTTTCACCCACTATTCTCTCACATAATTTTGAAGCAAATCCTATC
GCCTGTATGTGTTTTATTATAAAGACGAATATTTTTTCTCCCCTTGGACATCTCTTAATC
TCAGCAATAGAACGTGCAGGTGGTTTTGGATTGTGAAAGATTTGAGGGGCTCTTTACCAT
AAGAAGACAGTATTCTTAGAGTTTTTGAGCTTCAGTTTTTGCTGTTGTGATTTAATTTTG
AAAATAGTTGATTTCTTTTAAGCTTGCTAATAGTAAGTATGTGGATTTTCCTTAACATTG
TAGATTTTCTTGGAAACAGAATTGTTCTACAAAGGTATCCGTCCTGCCATTAACGTTGGT
TTGTCTGTATCTCGTGTGGGATCTGCTGCCCAAACCAGGGCCATGAAGCAGGTAATTGAA
TTACTTTGTCTTTAGGTTAAAAATCAAAGTGTATTGTATTGTGGTCCTCAGTGTATGTCA
CTGAGGTTAGGGTTTTTGTATCATCTGAATTAACTATTCCTATATGTCAGGTGGCAGGTA
CCATGAAACTGGAATTGGCTCAGTATCGTGAAGTTGCTGCTTTTGCCCAGTTCGGTTCTG
ACCTGGATGCTG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               178-732, gnl|bosTau2|chr24 (33162270-33161726)
               

               
               178-732, gnl|Hg17|chr18 (41920692-41920140)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               178-732, gnl|bosTau2|chr24 (33162270-33161726)
               

               
               178-732, gnl|Hg17|chr18 (41920692-41920140)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               liv (0.146284)
               

               
               che (0.136314)
               

               
               ssp (0.13552)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               che (0.136314)
               

               
               ssp (0.13552)

	178-732, gnl\|bosTau2\|chr24 (33162270-33161726)
	178-732, gnl\|Hg17\|chr18 (41920692-41920140)