Non-Coding RNA Search

Ss1.1-rpliv0109_k2.5

Sequence:


               
               TGGATACTTAATATAAAAAAGAGGAAATATTTTCCCATAAATTTTTCCATTAAGGAAACT
CAAAATATAACATTCAAGTACCATTGTAAAACAAATTAACTGATGAGACCAACGAAATTC
TTTGGGATAGATAACATTTCACGCCACCAGGATAAAATTAGTGTCCCTGTCATGAATAGA
TTCTAAATGTTCACCTGGGACCTATGGCTCCAAGTTGTACAAAAACACATGCCACTGTGT
CCTGGCCTTATGCCCACAGTCTACAGCTTGCCAACTCCTGGCCTAAGCACCACCAGCGTG
GGATGTAATGGAAAAAAATTTCCCGTACTGAGGTATAGGGAAGTCATTCTGGCTTATACA
TGATTTAACTTGAATTTTACACTAAAACAGCCTGTTTGTAGCCTGTCAAACATACATTGT
GCATTTGCTTTAATCATGAAAGAAAAAGGTTCATTGTCCAAGAGAACAGTGTGCCCATGT
TAAAAACAAAGATGAAATGCTTCCCTTCCTGGGACTCAAATGCTGGTATTCCTTCAATGA
TAAAACTCCCTG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------TAAAGAAAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGATACTTAATATAAAAAAGAGGAAATATTTTCCCATAAATTTTTCCATTAAGGAAACT
CAAAATATAACATTCAAGTACCATTGTAAAACAAATTAACTGATGAGACCAACGAAATTC
TTTGGGATAGATAACATTTCACGCCACCAGGATAAAATTAGTGTCCCTGTCATGAATAGA
TTCTAAATGTTCACCTGGGACCTATGGCTCCAAGTTGTACAAAAACACATGCCACTGTGT
CCTGGCCTTATGCCCACAGTCTACAGCTTGCCAACTCCTGGCCTAAGCACCACCAGCGTG
GGATGTAATGGAAAAAAATTTCCCGTACTGAGGTATAGGGAAGTCATTCTGGCTTATACA
TGATTTAACTTGAATTTTACACTAAAACAGCCTGTTTGTAGCCTGTCAAACATACATTGT
GCATTTGCTTTAATCATGAAAGAAAAAGGTTCATTGTCCAAGAGAACAGTGTGCCCATGT
TAAAAACAAAGATGAAATGCTTCCCTTCCTGGGACTCAAATGCTGGTATTCCTTCAATGA
TAAAACTCCCTG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------TAAAGAAAGAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               312-551, gnl|bosTau2|chr14 (33460560-33460322)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               312-551, gnl|bosTau2|chr14 (33460560-33460322)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)