Non-Coding RNA Search

Ss1.1-rpliv0110_c11.5

Sequence:


               
               TGGGAAAAAAGAGCGAGGGTGTGCTTGATCCATTTATTTTGCTTCGTTTGTTTTCTAGCC
ATCATTTTTTTGACATTAGAATTGCTTTTGAGACATTTTTCATGGTTTCTAATGGTAACT
TCAATGTTCCCTGTTCATCTAGAAAGCAAAAACCTAGGAATTAGGTTACTGAGTTGCAAA
TGGAGACCTAATCAGTGTTTCCGGTTTTTTATAAAATTAATCAAGACTGAAAATACATTT
GCTTAGATTTACTCTGTAAGGTAGTTTATTTGGCTTTCATAATCGAACAGTTCAACTGAA
TTGGAAAGCCCTAGTTGTATGGTTTCTGGGGAACACAGGAAAATTAAATTTATGTATGTA
ATTTTTACATCTAGTTTTCTTTTAAGATATTACAACCCTGAGGAGTGTTGATAGGTATGG
TGTATGATTCAAACTGAATCAGCTATTACTGATGAAGGTAAGGAACCATTAGTAAACCTC
TGGTTATGATCACCTTCTATTAAAAAATGGATGGATAATCTTCAAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGAAAAAAGAGCGAGGGTGTGCTTGATCCATTTATTTTGCTTCGTTTGTTTTCTAGCC
ATCATTTTTTTGACATTAGAATTGCTTTTGAGACATTTTTCATGGTTTCTAATGGTAACT
TCAATGTTCCCTGTTCATCTAGAAAGCAAAAACCTAGGAATTAGGTTACTGAGTTGCAAA
TGGAGACCTAATCAGTGTTTCCGGTTTTTTATAAAATTAATCAAGACTGAAAATACATTT
GCTTAGATTTACTCTGTAAGGTAGTTTATTTGGCTTTCATAATCGAACAGTTCAACTGAA
TTGGAAAGCCCTAGTTGTATGGTTTCTGGGGAACACAGGAAAATTAAATTTATGTATGTA
ATTTTTACATCTAGTTTTCTTTTAAGATATTACAACCCTGAGGAGTGTTGATAGGTATGG
TGTATGATTCAAACTGAATCAGCTATTACTGATGAAGGTAAGGAACCATTAGTAAACCTC
TGGTTATGATCACCTTCTATTAAAAAATGGATGGATAATCTTCAAGAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-367, gnl|bosTau2|chr2 (42755749-42755390)
               

               
               3-367, gnl|Hg17|chr2 (196885967-196885619)
               

               
               3-367, gnl|Mm7|chr1 (54041854-54041547)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-367, gnl|bosTau2|chr2 (42755749-42755390)
               

               
               3-367, gnl|Hg17|chr2 (196885967-196885619)
               

               
               3-367, gnl|Mm7|chr1 (54041854-54041547)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.292569)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.292569)
               

               
               eru (0.120048)

	3-367, gnl\|bosTau2\|chr2 (42755749-42755390)
	3-367, gnl\|Hg17\|chr2 (196885967-196885619)
	3-367, gnl\|Mm7\|chr1 (54041854-54041547)