Non-Coding RNA Search

Ss1.1-rpliv0115_d19.5

Sequence:


               
               TAGCCTTTTCTCCTCCTGACTAAATCATCTCAGTACCTAAGCATAGCCTCCTGGGGTATT
TTCTCAATCTCTCACTGTCAAGACCCTCTTCCAAATGCTTGCATCTATAGCCTGTGTAAA
CTTGTGTAGCCCTAGCCTTGTGCATCTTGGTCAGGTCGGGTTTATAAACACTTCCAAGAG
CAGGGAGATTCTCTCTCAGTTACCTTCACTTTGTCTCTCATCAAACAAAACACCTCCGTA
AGTGAGCCACTCTTTTCCCAAGTAAACTTGACAGACATACCCATAATGCATATATGCATG
CATATATATAAATACGTACTTAAAAATTTTTAAAGAATCATAGTAAATGCCTTTTATCTT
GAACATCTAAAAATGATGCAGAATATTTGAAAGTACTTTTAGTTCAGTAAAAAGGAGCTC
TTGTAAAATAATAGCGTGGGGCTGTCTATCACCATCTGTCGTAAAGGCACAAAACAGTGC
TGTCTCTATCAATAAATTTTAAGAGTATTTCATGAACTCTGTTCTGCTCCTGGGTCTAGC
ATGCTCACCTGAACATTGTCAAATTTCGCAAATATGCATAATTCCAGAAATTCCTTGTAT
TTGGCACCAAGACACCAAGCATAAATTGTTATGAAGAAGATATAGTAATACCTTATGTTC
ATCTCTAAAAGTCTATTACACATATAAACATGTCTCTGGAAACTTCCAGAGAATCTCATT
CCGTTACTTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGCCTTTTCTCCTCCTGACTAAATCATCTCAGTACCTAAGCATAGCCTCCTGGGGTATT
TTCTCAATCTCTCACTGTCAAGACCCTCTTCCAAATGCTTGCATCTATAGCCTGTGTAAA
CTTGTGTAGCCCTAGCCTTGTGCATCTTGGTCAGGTCGGGTTTATAAACACTTCCAAGAG
CAGGGAGATTCTCTCTCAGTTACCTTCACTTTGTCTCTCATCAAACAAAACACCTCCGTA
AGTGAGCCACTCTTTTCCCAAGTAAACTTGACAGACATACCCATAATGCATATATGCATG
CATATATATAAATACGTACTTAAAAATTTTTAAAGAATCATAGTAAATGCCTTTTATCTT
GAACATCTAAAAATGATGCAGAATATTTGAAAGTACTTTTAGTTCAGTAAAAAGGAGCTC
TTGTAAAATAATAGCGTGGGGCTGTCTATCACCATCTGTCGTAAAGGCACAAAACAGTGC
TGTCTCTATCAATAAATTTTAAGAGTATTTCATGAACTCTGTTCTGCTCCTGGGTCTAGC
ATGCTCACCTGAACATTGTCAAATTTCGCAAATATGCATAATTCCAGAAATTCCTTGTAT
TTGGCACCAAGACACCAAGCATAAATTGTTATGAAGAAGATATAGTAATACCTTATGTTC
ATCTCTAAAAGTCTATTACACATATAAACATGTCTCTGGAAACTTCCAGAGAATCTCATT
CCGTTACTTGGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-441, gnl|bosTau2|chr11 (15602538-15602985)
               

               
               1-441, gnl|Hg17|chr2 (39314066-39313545)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-441, gnl|bosTau2|chr11 (15602538-15602985)
               

               
               1-441, gnl|Hg17|chr2 (39314066-39313545)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               liv (0.146284)

	1-441, gnl\|bosTau2\|chr11 (15602538-15602985)
	1-441, gnl\|Hg17\|chr2 (39314066-39313545)