Ss1.1-rpliv0115_g10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAAGTTGGAAACTCAGCTCTGTATTTATTTGAGTGCTACGATACGAGAACTGAAAGTTG GCACACAAAGCCCAGCATGCTGACTCAGCGCTGCAGCCACGGGATGGTGGAAGCCAATGG CCTGATCTATGTTTGTGGTGGAAGTTTAGGAAACAATGTTTCTGGGCGAGTATTGAATTC CTGTGAAGTCTATGATCCTGCCACAGAAACATGGACTGAACTGTGTCCAATGATTGAGGC CAGGAAGAATCATGGACTGGTATTTGTAAAGGACAAGATATTTGCTGTGGGTGGTCAGAA TGGCTTAGGTGGTCTGGACAATGTGGAATACTATGATATTAAATTAAATGAATGGAAGAT GGTCTCACCAATGCCATGGAAGGGTGTCACAGTGAAGTGTGCAGCAGTTGGTTCTGTAGT TTATGTCTTGGCTGGTTTTCAAGGTGTGGGTCGGTTAGGACACATCCTTGAGTACAATAC TGAAACAGATAAGTGGGTCGCCAACTCCAAAGTCCGTGCTTTTCCAGTAACAAGTTGTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAAGTTGGAAACTCAGCTCTGTATTTATTTGAGTGCTACGATACGAGAACTGAAAGTTG GCACACAAAGCCCAGCATGCTGACTCAGCGCTGCAGCCACGGGATGGTGGAAGCCAATGG CCTGATCTATGTTTGTGGTGGAAGTTTAGGAAACAATGTTTCTGGGCGAGTATTGAATTC CTGTGAAGTCTATGATCCTGCCACAGAAACATGGACTGAACTGTGTCCAATGATTGAGGC CAGGAAGAATCATGGACTGGTATTTGTAAAGGACAAGATATTTGCTGTGGGTGGTCAGAA TGGCTTAGGTGGTCTGGACAATGTGGAATACTATGATATTAAATTAAATGAATGGAAGAT GGTCTCACCAATGCCATGGAAGGGTGTCACAGTGAAGTGTGCAGCAGTTGGTTCTGTAGT TTATGTCTTGGCTGGTTTTCAAGGTGTGGGTCGGTTAGGACACATCCTTGAGTACAATAC TGAAACAGATAAGTGGGTCGCCAACTCCAAAGTCCGTGCTTTTCCAGTAACAAGTTGTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 8-210, gnl|bosTau2|chr4 (11789839-11790041) | |
| 8-210, gnl|canFam2|chr14 (39810847-39811076) | |
| 8-210, gnl|dasNov1|scaffold_8559 (42698-42918) | |
| 8-210, gnl|echTel1|scaffold_320277 (43576-43357) | |
| 8-210, gnl|fr1|chrUn (126164025-126164247) | |
| 8-210, gnl|galGal2|chr2 (30268537-30268757) | |
| 8-210, gnl|hg17|chr7 (22980675-22980895) | |
| 8-210, gnl|Hg17|chr7 (22980694-22980896) | |
| 8-210, gnl|loxAfr1|scaffold_7519 (34711-34933) | |
| 8-210, gnl|mm7|chr5 (23197363-23197583) | |
| 8-210, gnl|Mm7|chr5 (23197382-23197584) | |
| 8-210, gnl|monDom2|scaffold_57 (4090646-4090426) | |
| 8-210, gnl|oryCun1|scaffold_97288 (9356-9556) | |
| 8-210, gnl|panTro1|chr6 (24050746-24050966) | |
| 8-210, gnl|rheMac2|chr3 (103086633-103086413) | |
| 8-210, gnl|rn3|chr4 (6378013-6377793) | |
| 8-210, gnl|tetNig1|chr21 (767764-767966) | |
| 8-210, gnl|xenTro1|scaffold_1176 (4256-4469) | |
| 307-540, gnl|bosTau2|chr4 (11794882-11795115) | |
| 307-540, gnl|canFam2|chr14 (39816736-39817040) | |
| 307-540, gnl|dasNov1|scaffold_8559 (47297-47567) | |
| 307-540, gnl|echTel1|scaffold_320277 (41136-40832) | |
| 307-540, gnl|fr1|chrUn (126164491-126164871) | |
| 307-540, gnl|galGal2|chr2 (30271151-30271452) | |
| 307-540, gnl|hg17|chr7 (22986857-22987158) | |
| 307-540, gnl|Hg17|chr7 (22986872-22987105) | |
| 307-540, gnl|loxAfr1|scaffold_7519 (39610-39911) | |
| 307-540, gnl|mm7|chr5 (23199923-23200224) | |
| 307-540, gnl|Mm7|chr5 (23199938-23200171) | |
| 307-540, gnl|monDom2|scaffold_57 (4084475-4084174) | |
| 307-540, gnl|oryCun1|scaffold_184993 (12097-12396) | |
| 307-540, gnl|panTro1|chr6 (24056931-24057232) | |
| 307-540, gnl|rheMac2|chr3 (103080227-103079926) | |
| 307-540, gnl|rn3|chr4 (6374715-6374414) | |
| 307-540, gnl|tetNig1|chr21 (768262-768627) | |
| 307-540, gnl|xenTro1|scaffold_1176 (7017-7318) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-210, gnl|bosTau2|chr4 (11789839-11790041) | |
| 8-210, gnl|canFam2|chr14 (39810847-39811076) | |
| 8-210, gnl|dasNov1|scaffold_8559 (42698-42918) | |
| 8-210, gnl|echTel1|scaffold_320277 (43576-43357) | |
| 8-210, gnl|fr1|chrUn (126164025-126164247) | |
| 8-210, gnl|galGal2|chr2 (30268537-30268757) | |
| 8-210, gnl|hg17|chr7 (22980675-22980895) | |
| 8-210, gnl|Hg17|chr7 (22980694-22980896) | |
| 8-210, gnl|loxAfr1|scaffold_7519 (34711-34933) | |
| 8-210, gnl|mm7|chr5 (23197363-23197583) | |
| 8-210, gnl|Mm7|chr5 (23197382-23197584) | |
| 8-210, gnl|monDom2|scaffold_57 (4090646-4090426) | |
| 8-210, gnl|oryCun1|scaffold_97288 (9356-9556) | |
| 8-210, gnl|panTro1|chr6 (24050746-24050966) | |
| 8-210, gnl|rheMac2|chr3 (103086633-103086413) | |
| 8-210, gnl|rn3|chr4 (6378013-6377793) | |
| 8-210, gnl|tetNig1|chr21 (767764-767966) | |
| 8-210, gnl|xenTro1|scaffold_1176 (4256-4469) | |
| 307-540, gnl|bosTau2|chr4 (11794882-11795115) | |
| 307-540, gnl|canFam2|chr14 (39816736-39817040) | |
| 307-540, gnl|dasNov1|scaffold_8559 (47297-47567) | |
| 307-540, gnl|echTel1|scaffold_320277 (41136-40832) | |
| 307-540, gnl|fr1|chrUn (126164491-126164871) | |
| 307-540, gnl|galGal2|chr2 (30271151-30271452) | |
| 307-540, gnl|hg17|chr7 (22986857-22987158) | |
| 307-540, gnl|Hg17|chr7 (22986872-22987105) | |
| 307-540, gnl|loxAfr1|scaffold_7519 (39610-39911) | |
| 307-540, gnl|mm7|chr5 (23199923-23200224) | |
| 307-540, gnl|Mm7|chr5 (23199938-23200171) | |
| 307-540, gnl|monDom2|scaffold_57 (4084475-4084174) | |
| 307-540, gnl|oryCun1|scaffold_184993 (12097-12396) | |
| 307-540, gnl|panTro1|chr6 (24056931-24057232) | |
| 307-540, gnl|rheMac2|chr3 (103080227-103079926) | |
| 307-540, gnl|rn3|chr4 (6374715-6374414) | |
| 307-540, gnl|tetNig1|chr21 (768262-768627) | |
| 307-540, gnl|xenTro1|scaffold_1176 (7017-7318) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| bla (0.248694) | |
| tbr (0.154178) | |
| fat (0.147427) | |
| liv (0.146284) | |
| ova (0.129132) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| bla (0.248694) | |
| tbr (0.154178) | |
| fat (0.147427) | |
| liv (0.146284) | |
| ova (0.129132) |