Ss1.1-rpliv0117_k21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTAGATGTAGCACCAGCTGATGGAGCATCGATTCAGCAAACTTTAAAACTGCTTGAAGAG AAGCTGAAAAGTGTTGATGTAGGATTGCAAGGTTTGCGTGAAAAAGGTCAAGGTCTTCTG GATCAGATCTCCAATCAGGCATCCTGGGCCTATGGAAAAGATGTAACCATTGAAAATAAA GAAAATGTGGACCACATACAAGGAGTGATGGAAGATATGCAGCTTAGGAAACAAAGATGT GAAGACATGGTAGATGTGCGAAGATTAAAGATGCTTCAAATGGTGCAGTTGTTTAAATGT GAAGAAGATGCTGCCCAGGCAGTAGAATGGCTAAGTGAACTTCTGGATGCTCTTCTTAAG ACCCACATCAGATTGGGAGATGATGCTCAGGAAACAAAAGTTTTATTGGAAAAGCACAGA AAATTTGTTGATGTTGCACAGAGCACTTATGACTATGGAAGACAGCTGCTGCAGGCCACA GTTGTTCTGTGTCAGTCTTTGCGCTGCACCTCTCGATCATCCGGGGACACACTTCCTCGA CTCAACAGAGTGTGGAAACAATTTACAATAGCATCTGAAGAGAGGGTACACAGGCTGGAA ATGGCTATTGCATTTCACTCTAATGCTGAAAAGATTTTGCAAGACTGTCCAGAAGAGCCT GAAGCTATTAATGATGAGGAGCAATTTGATGAAATTGAAGCAGTTGGGAAATCACTTTTA GATAGACTAACTGTTCCTGTAGTTTATCCCGATGGGTATGGTGCATGTTCTTATAATTTG TCTTTTTATCGGTAAGGTCTTAAAGTGATATCAAGAGAAGAAAGTCTCTTTTTAAAAAAG CCAAATAAACTAGGTATGGTTCATATCCTCCATTTCTACATTAAATTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTAGATGTAGCACCAGCTGATGGAGCATCGATTCAGCAAACTTTAAAACTGCTTGAAGAG AAGCTGAAAAGTGTTGATGTAGGATTGCAAGGTTTGCGTGAAAAAGGTCAAGGTCTTCTG GATCAGATCTCCAATCAGGCATCCTGGGCCTATGGAAAAGATGTAACCATTGAAAATAAA GAAAATGTGGACCACATACAAGGAGTGATGGAAGATATGCAGCTTAGGAAACAAAGATGT GAAGACATGGTAGATGTGCGAAGATTAAAGATGCTTCAAATGGTGCAGTTGTTTAAATGT GAAGAAGATGCTGCCCAGGCAGTAGAATGGCTAAGTGAACTTCTGGATGCTCTTCTTAAG ACCCACATCAGATTGGGAGATGATGCTCAGGAAACAAAAGTTTTATTGGAAAAGCACAGA AAATTTGTTGATGTTGCACAGAGCACTTATGACTATGGAAGACAGCTGCTGCAGGCCACA GTTGTTCTGTGTCAGTCTTTGCGCTGCACCTCTCGATCATCCGGGGACACACTTCCTCGA CTCAACAGAGTGTGGAAACAATTTACAATAGCATCTGAAGAGAGGGTACACAGGCTGGAA ATGGCTATTGCATTTCACTCTAATGCTGAAAAGATTTTGCAAGACTGTCCAGAAGAGCCT GAAGCTATTAATGATGAGGAGCAATTTGATGAAATTGAAGCAGTTGGGAAATCACTTTTA GATAGACTAACTGTTCCTGTAGTTTATCCCGATGGGTATGGTGCATGTTCTTATAATTTG TCTTTTTATCGGTAAGGTCTTAAAGTGATATCAAGAGAAGAAAGTCTCTTTTTAAAAAAG CCAAATAAACTAGGTATGGTTCATATCCTCCATTTCTACATTAAATTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 76-236, gnl|bosTau2|chr2 (8751150-8751310) | |
| 76-236, gnl|canFam2|chr36 (25704769-25704901) | |
| 76-236, gnl|danRer3|chr9 (37900934-37901073) | |
| 76-236, gnl|dasNov1|scaffold_1977 (5613-5745) | |
| 76-236, gnl|echTel1|scaffold_309298 (349-217) | |
| 76-236, gnl|fr1|chrUn (34578193-34578065) | |
| 76-236, gnl|galGal2|chr7 (15859707-15859575) | |
| 76-236, gnl|hg17|chr2 (179811990-179812122) | |
| 76-236, gnl|Hg17|chr2 (179812163-179812003) | |
| 76-236, gnl|loxAfr1|scaffold_2511 (57446-57314) | |
| 76-236, gnl|mm7|chr2 (77040526-77040658) | |
| 76-236, gnl|Mm7|chr2 (77040699-77040539) | |
| 76-236, gnl|monDom2|scaffold_2 (80096767-80096896) | |
| 76-236, gnl|oryCun1|scaffold_189050 (6432-6305) | |
| 76-236, gnl|panTro1|chr13 (69600696-69600828) | |
| 76-236, gnl|rheMac2|chr12 (42752171-42752303) | |
| 76-236, gnl|rn3|chr3 (59779997-59780129) | |
| 76-236, gnl|tetNig1|chr2 (7183762-7183890) | |
| 76-236, gnl|xenTro1|scaffold_546 (648063-648195) | |
| 316-441, gnl|bosTau2|chr2 (8756878-8757003) | |
| 316-441, gnl|Hg17|chr2 (179807026-179806901) | |
| 316-441, gnl|Mm7|chr2 (77035540-77035415) | |
| 632-886, gnl|bosTau2|chr2 (8760665-8760919) | |
| 632-886, gnl|Hg17|chr2 (179803080-179802824) | |
| 632-886, gnl|Mm7|chr2 (77032339-77032132) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-236, gnl|bosTau2|chr2 (8751150-8751310) | |
| 76-236, gnl|canFam2|chr36 (25704769-25704901) | |
| 76-236, gnl|danRer3|chr9 (37900934-37901073) | |
| 76-236, gnl|dasNov1|scaffold_1977 (5613-5745) | |
| 76-236, gnl|echTel1|scaffold_309298 (349-217) | |
| 76-236, gnl|fr1|chrUn (34578193-34578065) | |
| 76-236, gnl|galGal2|chr7 (15859707-15859575) | |
| 76-236, gnl|hg17|chr2 (179811990-179812122) | |
| 76-236, gnl|Hg17|chr2 (179812163-179812003) | |
| 76-236, gnl|loxAfr1|scaffold_2511 (57446-57314) | |
| 76-236, gnl|mm7|chr2 (77040526-77040658) | |
| 76-236, gnl|Mm7|chr2 (77040699-77040539) | |
| 76-236, gnl|monDom2|scaffold_2 (80096767-80096896) | |
| 76-236, gnl|oryCun1|scaffold_189050 (6432-6305) | |
| 76-236, gnl|panTro1|chr13 (69600696-69600828) | |
| 76-236, gnl|rheMac2|chr12 (42752171-42752303) | |
| 76-236, gnl|rn3|chr3 (59779997-59780129) | |
| 76-236, gnl|tetNig1|chr2 (7183762-7183890) | |
| 76-236, gnl|xenTro1|scaffold_546 (648063-648195) | |
| 316-441, gnl|bosTau2|chr2 (8756878-8757003) | |
| 316-441, gnl|Hg17|chr2 (179807026-179806901) | |
| 316-441, gnl|Mm7|chr2 (77035540-77035415) | |
| 632-886, gnl|bosTau2|chr2 (8760665-8760919) | |
| 632-886, gnl|Hg17|chr2 (179803080-179802824) | |
| 632-886, gnl|Mm7|chr2 (77032339-77032132) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.146284) | |
| bla (0.124347) |