Non-Coding RNA Search

Ss1.1-rpliv0126_i18.5

Sequence:


               
               GATGTACTCAGTACCACAGACCATACACTTAAAAGTGGCTAAGATGGTAAATTTCATGTC
TGTTTTACCACTTCTCTCAAAAAAAAAAAAAAAAGCATTTCGGGGTAATAGCACTGTTGT
GTTGCAGCTAACAACAGGACTGAGTTGATTGCTCTCTTCTTTAGACAGTCCAGTGTGAAG
ATAATTGCTATTTCAAATAAGCAATTAAAGTATAATTCCCCATGTCTTTATGCATTTAAA
GTTCTCTAATCTGTAGACTGTTAGACATATTTCCAGGGTTTCTGACATAGCTTAACATCA
CTTTAAAATTCTGTAAAAGATAAAACCATAATAGCAGTGAGAGTACCAAAGGCAGAATGA
GACAACAGCCTCAACAAGAAGGCAGGTGATGGGGCATTTGATGCTGGCCGTATGCCTTTT
CTGGTGAAATTGGGCAATGCACTGGACCATTTCATGCATTCCATGCTCCACCTGCCTCCT
TTGCCTACCTCTTGGGAGTCCTGATAAAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TAAACTGTATATTATACAGAATTCCCTGGTGGCTCAGTGGGTTAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGTACTCAGTACCACAGACCATACACTTAAAAGTGGCTAAGATGGTAAATTTCATGTC
TGTTTTACCACTTCTCTCAAAAAAAAAAAAAAAAGCATTTCGGGGTAATAGCACTGTTGT
GTTGCAGCTAACAACAGGACTGAGTTGATTGCTCTCTTCTTTAGACAGTCCAGTGTGAAG
ATAATTGCTATTTCAAATAAGCAATTAAAGTATAATTCCCCATGTCTTTATGCATTTAAA
GTTCTCTAATCTGTAGACTGTTAGACATATTTCCAGGGTTTCTGACATAGCTTAACATCA
CTTTAAAATTCTGTAAAAGATAAAACCATAATAGCAGTGAGAGTACCAAAGGCAGAATGA
GACAACAGCCTCAACAAGAAGGCAGGTGATGGGGCATTTGATGCTGGCCGTATGCCTTTT
CTGGTGAAATTGGGCAATGCACTGGACCATTTCATGCATTCCATGCTCCACCTGCCTCCT
TTGCCTACCTCTTGGGAGTCCTGATAAAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TAAACTGTATATTATACAGAATTCCCTGGTGGCTCAGTGGGTTAAAGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               12-453, gnl|bosTau2|chr4 (5160074-5160508)
               

               
               12-453, gnl|Hg17|chr1 (65232765-65232360)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-453, gnl|bosTau2|chr4 (5160074-5160508)
               

               
               12-453, gnl|Hg17|chr1 (65232765-65232360)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               liv (0.146284)

	12-453, gnl\|bosTau2\|chr4 (5160074-5160508)
	12-453, gnl\|Hg17\|chr1 (65232765-65232360)