Non-Coding RNA Search

Ss1.1-rpliv0127_k22.5

Sequence:


               
               AAATCCTTGGCTGCAGAAAATGTAAATTGAAAAAAACAGAACCTACTCCAGTTGTCGAGG
AGGATGAAATGCAGCCCTATGCCAGCTACACGGAGAAGAATAATCCACTTTACGATACCA
CAAACAGAGTGAAGACATCTCAGGTGTTAAATGAAGTTGATGGGATAAATCTCCATACTA
TATATGTTTTTGGCATCTCTCACGAGGACAAATGAATCAAGATACAGTATGGATCCTGTT
TTGATTTTCTTAGAGTTCTAGAATGGAAGGTCTATTTGGAAACAAGTTTTTCAAAGATTC
TTAGAAGACAGAGACATTCTAGAGGATTTTCATTCATTTCCTTATACGATTGAAATTTTA
GAATTTTAGCTGTTACTACCCAGTCCTGTGAAAAATGGATATTATTACAAAGATAGCACA
TACTCATGATGAAATATTCAAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATCCTTGGCTGCAGAAAATGTAAATTGAAAAAAACAGAACCTACTCCAGTTGTCGAGG
AGGATGAAATGCAGCCCTATGCCAGCTACACGGAGAAGAATAATCCACTTTACGATACCA
CAAACAGAGTGAAGACATCTCAGGTGTTAAATGAAGTTGATGGGATAAATCTCCATACTA
TATATGTTTTTGGCATCTCTCACGAGGACAAATGAATCAAGATACAGTATGGATCCTGTT
TTGATTTTCTTAGAGTTCTAGAATGGAAGGTCTATTTGGAAACAAGTTTTTCAAAGATTC
TTAGAAGACAGAGACATTCTAGAGGATTTTCATTCATTTCCTTATACGATTGAAATTTTA
GAATTTTAGCTGTTACTACCCAGTCCTGTGAAAAATGGATATTATTACAAAGATAGCACA
TACTCATGATGAAATATTCAAATT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               61-444, gnl|bosTau2|chr1 (33521009-33521392)
               

               
               61-444, gnl|Hg17|chr3 (114125338-114124960)
               

               
               61-444, gnl|Mm7|chr16 (44571724-44572110)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               61-444, gnl|bosTau2|chr1 (33521009-33521392)
               

               
               61-444, gnl|Hg17|chr3 (114125338-114124960)
               

               
               61-444, gnl|Mm7|chr16 (44571724-44572110)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               liv (0.292569)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.292569)
               

               
               spl (0.143184)

	61-444, gnl\|bosTau2\|chr1 (33521009-33521392)
	61-444, gnl\|Hg17\|chr3 (114125338-114124960)
	61-444, gnl\|Mm7\|chr16 (44571724-44572110)