Non-Coding RNA Search

Ss1.1-rpliv0127_m10.5

Sequence:


               
               AAAAAAAAAAACTAGTTGATTTTACTGCATTTTAAAAGATAGGTAAGTAGGTAGCATTTA
AAATCCAGATAGAGCCTTTCTGCTGGTTTCGCTGGGGCGGTGTTGGCCTAAACACAGCAG
GTGTGACGTTAGCCACCTCGGCAGATAGTCTGCTTCACAGGCAGCTGGTATTTTGTGGGT
ACCTCCCCTGCCCTTGGGAAGACGCTTTGCTTTGGGGGGTCTTTAACTGAAATATTTGAA
GAGTGTTTATTTAACCTTTCCAGTATTCTCTTCCATACTTAGATGGAAAATGTATCTTAT
GAATAGAGACATGTTAAAATAATGTTTACATCTTAGAAAAAGCCAGAAATAGTGCTAGAC
ATTTTGCTTATATTTGCAATATGTAGACTCAGAAATGCATTTGCATTGTCCAGAATCAGC
TTTCACATGTGGTTTCTGGAAACAAATAATTTGTTTTCATTATCTGTGTGTAATTAGAAT
TACAGGTTAACGATTTATCTTCTGACTTAATGTGCAATTTCTTATCACAAGAGAACTTTC
TGTGATGGTCAGTGGTGGTTAATTGTTCCTTATCTTTAAGTTAAAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAAAAAACTAGTTGATTTTACTGCATTTTAAAAGATAGGTAAGTAGGTAGCATTTA
AAATCCAGATAGAGCCTTTCTGCTGGTTTCGCTGGGGCGGTGTTGGCCTAAACACAGCAG
GTGTGACGTTAGCCACCTCGGCAGATAGTCTGCTTCACAGGCAGCTGGTATTTTGTGGGT
ACCTCCCCTGCCCTTGGGAAGACGCTTTGCTTTGGGGGGTCTTTAACTGAAATATTTGAA
GAGTGTTTATTTAACCTTTCCAGTATTCTCTTCCATACTTAGATGGAAAATGTATCTTAT
GAATAGAGACATGTTAAAATAATGTTTACATCTTAGAAAAAGCCAGAAATAGTGCTAGAC
ATTTTGCTTATATTTGCAATATGTAGACTCAGAAATGCATTTGCATTGTCCAGAATCAGC
TTTCACATGTGGTTTCTGGAAACAAATAATTTGTTTTCATTATCTGTGTGTAATTAGAAT
TACAGGTTAACGATTTATCTTCTGACTTAATGTGCAATTTCTTATCACAAGAGAACTTTC
TGTGATGGTCAGTGGTGGTTAATTGTTCCTTATCTTTAAGTTAAAAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-387, gnl|bosTau2|chr4 (40473054-40473444)
               

               
               3-387, gnl|Hg17|chr7 (26185715-26186092)
               

               
               3-387, gnl|Mm7|chr6 (51552489-51552888)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-387, gnl|bosTau2|chr4 (40473054-40473444)
               

               
               3-387, gnl|Hg17|chr7 (26185715-26186092)
               

               
               3-387, gnl|Mm7|chr6 (51552489-51552888)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               liv (1.17027)
               

               
               cty (0.20816)
               

               
               cki (0.165235)
               

               
               cbl (0.114797)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (1.17027)
               

               
               cty (0.20816)
               

               
               cki (0.165235)
               

               
               cbl (0.114797)

	3-387, gnl\|bosTau2\|chr4 (40473054-40473444)
	3-387, gnl\|Hg17\|chr7 (26185715-26186092)
	3-387, gnl\|Mm7\|chr6 (51552489-51552888)