Non-Coding RNA Search

Ss1.1-rpliv0130_l14.5

Sequence:


               
               AGGCCTCTATCTTTTTATAGATTTTTTTTAAACTGAAAATTATGCCTATGGCAAGTTCAA
AAGAAAATTAACCATCTGTCAGTAGATAATGAAGGTTGGTTAAGGATTTAATGGATGGGG
GCTTCAAAAGCAATATTTTATTGTGGGCTTCACTTTTGAGATTAAGATGTTACTAACAGA
ATTGGTCTGCTTTTGCTATTCCCTCCAATTAAAATAAACTTGTATAGTGTTGAGTGTCAA
TTCTTTCCATTAGTAATGTGTTTGAGCCAACAGGACAAAGCAAAATGAAGAACTTGGCTT
TGAAAAATGTGTTTCTTGCTTTCAGAAATTGAATTAAACATTCAAAAACAGGATTTTTAA
ACAGTGCTTTTAAAATGATTTTTTATAAAGCAGCAGGTATACAAAAATCCTAAAACTATA
TTGTCAATTTAAGACTGGAGAGATTCAAAATTACATTGATTAATAGACATGACAACGAAT
TTATTTCTTACCACTTAAAAAATGATGGTCATTACTTGAAATTTTGATGAAATTGAATTT
TTCAAAAGAGATCTCCTGCAGAGTTCTTTTAATGTAACCATTAATCAAACTTTAAACTTT
CAGATGTGAATACAGCATAATCTTTGTTAGACAACTTGAGAAATTTAATTTTGATACGCC
TTGCCTGTTCAGAGGATTCAGTTAGAAACCGTATTTCACATCTGAGGGCAAGTAGCCCAT
TTGAAGATAAGATATTTTTAGAGGAAAACCTTCTTTTGATAGTGGGTTGTCAAAGATTTA
AAATCTTTATCAGTTTTAAATTTGTTTACAAAGTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCCTCTATCTTTTTATAGATTTTTTTTAAACTGAAAATTATGCCTATGGCAAGTTCAA
AAGAAAATTAACCATCTGTCAGTAGATAATGAAGGTTGGTTAAGGATTTAATGGATGGGG
GCTTCAAAAGCAATATTTTATTGTGGGCTTCACTTTTGAGATTAAGATGTTACTAACAGA
ATTGGTCTGCTTTTGCTATTCCCTCCAATTAAAATAAACTTGTATAGTGTTGAGTGTCAA
TTCTTTCCATTAGTAATGTGTTTGAGCCAACAGGACAAAGCAAAATGAAGAACTTGGCTT
TGAAAAATGTGTTTCTTGCTTTCAGAAATTGAATTAAACATTCAAAAACAGGATTTTTAA
ACAGTGCTTTTAAAATGATTTTTTATAAAGCAGCAGGTATACAAAAATCCTAAAACTATA
TTGTCAATTTAAGACTGGAGAGATTCAAAATTACATTGATTAATAGACATGACAACGAAT
TTATTTCTTACCACTTAAAAAATGATGGTCATTACTTGAAATTTTGATGAAATTGAATTT
TTCAAAAGAGATCTCCTGCAGAGTTCTTTTAATGTAACCATTAATCAAACTTTAAACTTT
CAGATGTGAATACAGCATAATCTTTGTTAGACAACTTGAGAAATTTAATTTTGATACGCC
TTGCCTGTTCAGAGGATTCAGTTAGAAACCGTATTTCACATCTGAGGGCAAGTAGCCCAT
TTGAAGATAAGATATTTTTAGAGGAAAACCTTCTTTTGATAGTGGGTTGTCAAAGATTTA
AAATCTTTATCAGTTTTAAATTTGTTTACAAAGTAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               7-814, gnl|bosTau2|chr1 (58486731-58485944)
               

               
               7-814, gnl|Hg17|chr10 (22647981-22648779)
               

               
               7-814, gnl|Mm7|chr2 (18740194-18740932)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-814, gnl|bosTau2|chr1 (58486731-58485944)
               

               
               7-814, gnl|Hg17|chr10 (22647981-22648779)
               

               
               7-814, gnl|Mm7|chr2 (18740194-18740932)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	7-814, gnl\|bosTau2\|chr1 (58486731-58485944)
	7-814, gnl\|Hg17\|chr10 (22647981-22648779)
	7-814, gnl\|Mm7\|chr2 (18740194-18740932)