Non-Coding RNA Search

Ss1.1-rpliv0133_a13.5

Sequence:


               
               GAAAAATAACGAGCAGTTTTATGATAGTCAGAACGTAGTAATAGTAACTCACAGTCTTCT
GTAGATAGCAGGATCTTATCACTCCTGCATGTCCCTATCCTAAGGACACAGAAACCGCAT
TGTTGGTTTCTGAGGATAATCAAACTGTTTGGTATGAGTATGGTTGTGTATGATAAAAAT
TGCACAAAATGTGTATGATGTCATTTCATATGCACTATGCTTCTCTAATCTGATTGGAAG
AGCTGCTGTTGGAAAGTAACATTTGGCTAGATTTATATTTTTAAATTGTGGCATAGTGTT
CAGATGTATATTGTGGCATGTATATAAATGAGACTGTGTAACCACAAGAAAGCTTGCATG
AAATATTAACTGCATTGTACATTTTCTGCATGATTTTAAAAACCTTAACAATACAAGCTC
CTCTTTCACATTTCTTGTCACCTAGTAAGAGATTGTTATTTTGATACCTAGAAGAATGTT
AAAATGGTTGCATGCTATAATTACCAAGAAGTCATTTCCAAGTCATATTTATTTTGTTGC
TTCCAAAAAAGAATGCTCATTTTCTTCCTCCCTCCCTTTTGCTCACTTTTTCCCTCCCTC
CTTCCTTCTCTTTCTGTCTTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAAATAACGAGCAGTTTTATGATAGTCAGAACGTAGTAATAGTAACTCACAGTCTTCT
GTAGATAGCAGGATCTTATCACTCCTGCATGTCCCTATCCTAAGGACACAGAAACCGCAT
TGTTGGTTTCTGAGGATAATCAAACTGTTTGGTATGAGTATGGTTGTGTATGATAAAAAT
TGCACAAAATGTGTATGATGTCATTTCATATGCACTATGCTTCTCTAATCTGATTGGAAG
AGCTGCTGTTGGAAAGTAACATTTGGCTAGATTTATATTTTTAAATTGTGGCATAGTGTT
CAGATGTATATTGTGGCATGTATATAAATGAGACTGTGTAACCACAAGAAAGCTTGCATG
AAATATTAACTGCATTGTACATTTTCTGCATGATTTTAAAAACCTTAACAATACAAGCTC
CTCTTTCACATTTCTTGTCACCTAGTAAGAGATTGTTATTTTGATACCTAGAAGAATGTT
AAAATGGTTGCATGCTATAATTACCAAGAAGTCATTTCCAAGTCATATTTATTTTGTTGC
TTCCAAAAAAGAATGCTCATTTTCTTCCTCCCTCCCTTTTGCTCACTTTTTCCCTCCCTC
CTTCCTTCTCTTTCTGTCTTTTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-618, gnl|bosTau2|chr11 (20368230-20367619)
               

               
               1-618, gnl|Hg17|chr2 (55434025-55433397)
               

               
               1-618, gnl|Mm7|chr11 (29456640-29457154)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-618, gnl|bosTau2|chr11 (20368230-20367619)
               

               
               1-618, gnl|Hg17|chr2 (55434025-55433397)
               

               
               1-618, gnl|Mm7|chr11 (29456640-29457154)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-618, gnl\|bosTau2\|chr11 (20368230-20367619)
	1-618, gnl\|Hg17\|chr2 (55434025-55433397)
	1-618, gnl\|Mm7\|chr11 (29456640-29457154)