Ss1.1-rpliv0133_b9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATTCTTTAATTTTTTTCTAATGATTTTTCATGCAGAACAAAGTCCATTCATGAAGAGCA ACTCAGTAGTATCTAATACAGTAGTAGAACATTTCATTCACACATCTAATTTGTTTCAGC TCTGGAAATTCAGCACTTCAATTGAGAGTAAAAATAAAGTCCTTCTCAAAACGTAGAGCT CTAGGGTAGCCTTTTATCTCAGGAGGCAGCATCAGCAGCTGAGTGCCTCAATATAAAAGC ACTAGGAACTATGTAAATGTTAAATAAATAAAATTTGAAAATATTCCAAGTGGCATATAT TATTGAAGAGTGATTTTTCTTTTATCAGAAACCATATATGTTCTTGGGGAGTCACATACA CTTTTTTTTGTTTTAATCTATGGCAGCTGGTCAGCTAGTAGTTAAAACTGTTTCACCATC TTGTTTCCAGATTTATTTTCAGTACCTAATCAGTAAGCATATATTCTTGCTTATAATTTC TACCCAAGTAAAATTAGATAGAAAGTTCCATATCGAACAGTATACAGTGCTCTGCTCTGT TTGCTAGCTTGTGATAAGTTCTGTATCCCTCCTAAGACTTTGCTAAGAATACTGATTGAC CTTGGTGGTTTCATTTTGTTCAACAGGTCATGTATGTGGAAGGAACCGCAGTTATTATGG GTTTTGAAGATCCCATGCTGCAGACAGATGACACTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATTCTTTAATTTTTTTCTAATGATTTTTCATGCAGAACAAAGTCCATTCATGAAGAGCA ACTCAGTAGTATCTAATACAGTAGTAGAACATTTCATTCACACATCTAATTTGTTTCAGC TCTGGAAATTCAGCACTTCAATTGAGAGTAAAAATAAAGTCCTTCTCAAAACGTAGAGCT CTAGGGTAGCCTTTTATCTCAGGAGGCAGCATCAGCAGCTGAGTGCCTCAATATAAAAGC ACTAGGAACTATGTAAATGTTAAATAAATAAAATTTGAAAATATTCCAAGTGGCATATAT TATTGAAGAGTGATTTTTCTTTTATCAGAAACCATATATGTTCTTGGGGAGTCACATACA CTTTTTTTTGTTTTAATCTATGGCAGCTGGTCAGCTAGTAGTTAAAACTGTTTCACCATC TTGTTTCCAGATTTATTTTCAGTACCTAATCAGTAAGCATATATTCTTGCTTATAATTTC TACCCAAGTAAAATTAGATAGAAAGTTCCATATCGAACAGTATACAGTGCTCTGCTCTGT TTGCTAGCTTGTGATAAGTTCTGTATCCCTCCTAAGACTTTGCTAAGAATACTGATTGAC CTTGGTGGTTTCATTTTGTTCAACAGGTCATGTATGTGGAAGGAACCGCAGTTATTATGG GTTTTGAAGATCCCATGCTGCAGACAGATGACACTC |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 11-183, gnl|bosTau2|chr13 (19409245-19409415) | |
| 11-183, gnl|canFam2|chr2 (23848347-23848128) | |
| 11-183, gnl|dasNov1|scaffold_39206 (4947-4703) | |
| 11-183, gnl|echTel1|scaffold_313155 (5547-5799) | |
| 11-183, gnl|hg17|chr10 (15861419-15861675) | |
| 11-183, gnl|Hg17|chr10 (15861744-15861570) | |
| 11-183, gnl|loxAfr1|scaffold_127923 (4890-5149) | |
| 11-183, gnl|mm7|chr2 (12287638-12287844) | |
| 11-183, gnl|Mm7|chr2 (12287923-12287756) | |
| 11-183, gnl|monDom2|scaffold_140 (1427150-1426879) | |
| 11-183, gnl|oryCun1|scaffold_179929 (13951-13711) | |
| 11-183, gnl|panTro1|chr8 (16358483-16358739) | |
| 11-183, gnl|rn3|chr17 (86705569-86705762) | |
| 566-694, gnl|bosTau2|chr13 (19409574-19409699) | |
| 566-694, gnl|canFam2|chr2 (23848766-23848560) | |
| 566-694, gnl|danRer3|chr16 (24521456-24521666) | |
| 566-694, gnl|dasNov1|scaffold_39206 (5406-5204) | |
| 566-694, gnl|echTel1|scaffold_313155 (5096-5303) | |
| 566-694, gnl|fr1|chrUn (229790598-229790447) | |
| 566-694, gnl|galGal2|chr2 (19632757-19632582) | |
| 566-694, gnl|hg17|chr10 (15860987-15861194) | |
| 566-694, gnl|Hg17|chr10 (15861207-15861079) | |
| 566-694, gnl|loxAfr1|scaffold_127923 (4439-4646) | |
| 566-694, gnl|mm7|chr2 (12287202-12287406) | |
| 566-694, gnl|Mm7|chr2 (12287399-12287294) | |
| 566-694, gnl|monDom2|scaffold_7 (54049698-54049490) | |
| 566-694, gnl|oryCun1|scaffold_179929 (14393-14186) | |
| 566-694, gnl|panTro1|chr8 (16358051-16358258) | |
| 566-694, gnl|rheMac2|chr9 (16066241-16066448) | |
| 566-694, gnl|rn3|chr17 (86705118-86705322) | |
| 566-694, gnl|tetNig1|chr8 (6962273-6962425) | |
| 566-694, gnl|xenTro1|scaffold_1237 (178946-179112) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 11-183, gnl|bosTau2|chr13 (19409245-19409415) | |
| 11-183, gnl|canFam2|chr2 (23848347-23848128) | |
| 11-183, gnl|dasNov1|scaffold_39206 (4947-4703) | |
| 11-183, gnl|echTel1|scaffold_313155 (5547-5799) | |
| 11-183, gnl|hg17|chr10 (15861419-15861675) | |
| 11-183, gnl|Hg17|chr10 (15861744-15861570) | |
| 11-183, gnl|loxAfr1|scaffold_127923 (4890-5149) | |
| 11-183, gnl|mm7|chr2 (12287638-12287844) | |
| 11-183, gnl|Mm7|chr2 (12287923-12287756) | |
| 11-183, gnl|monDom2|scaffold_140 (1427150-1426879) | |
| 11-183, gnl|oryCun1|scaffold_179929 (13951-13711) | |
| 11-183, gnl|panTro1|chr8 (16358483-16358739) | |
| 11-183, gnl|rn3|chr17 (86705569-86705762) | |
| 566-694, gnl|bosTau2|chr13 (19409574-19409699) | |
| 566-694, gnl|canFam2|chr2 (23848766-23848560) | |
| 566-694, gnl|danRer3|chr16 (24521456-24521666) | |
| 566-694, gnl|dasNov1|scaffold_39206 (5406-5204) | |
| 566-694, gnl|echTel1|scaffold_313155 (5096-5303) | |
| 566-694, gnl|fr1|chrUn (229790598-229790447) | |
| 566-694, gnl|galGal2|chr2 (19632757-19632582) | |
| 566-694, gnl|hg17|chr10 (15860987-15861194) | |
| 566-694, gnl|Hg17|chr10 (15861207-15861079) | |
| 566-694, gnl|loxAfr1|scaffold_127923 (4439-4646) | |
| 566-694, gnl|mm7|chr2 (12287202-12287406) | |
| 566-694, gnl|Mm7|chr2 (12287399-12287294) | |
| 566-694, gnl|monDom2|scaffold_7 (54049698-54049490) | |
| 566-694, gnl|oryCun1|scaffold_179929 (14393-14186) | |
| 566-694, gnl|panTro1|chr8 (16358051-16358258) | |
| 566-694, gnl|rheMac2|chr9 (16066241-16066448) | |
| 566-694, gnl|rn3|chr17 (86705118-86705322) | |
| 566-694, gnl|tetNig1|chr8 (6962273-6962425) | |
| 566-694, gnl|xenTro1|scaffold_1237 (178946-179112) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.146284) |