Non-Coding RNA Search

Ss1.1-rpliv0138_o7.5

Sequence:


               
               GGTGCTTTTCTGCATATAACAAGAAACAGGTACCAAGCATTATTGATTCATGTACCTAAA
ATAAACCAGAGTTTAAATGGGCTTCAGGCATGGTTTGATTGGGGCTTAGGCTCAGTGTCT
GTGATTTGTTAAGATTTCCCCTCTTCTGTATGTCAATTCCATTCTCAGACTACCTTTCCT
CATGGTAGCAAAATTAGCCTAGAAGTTCCAGATCATAGCAGTTCAAGTCTAGAGAGAAAT
AAATAAACCTATGTCCTGTGATGCATTCTGAACTGGCTTAGGTCACATACCTGGACCAAT
CACTAAAGTCACATGGGTGAAATGCGCTGATTGACTTGGCTAGGACATGTGTTCCATCCC
TGAACCCTAAGATATATCTCACTAGAACCAAATGGATTCCTAGTGAAATCAAGGGCTTGA
AGAGTGAATGCCATGAACCAATCAAAAATGTCTAGTATAGCTTCTTCCTTTGTGTACTGA
GCTCTCATGGACACATTTATTCCCACATACTCACTTTCAAAAATGCTCATACTTACATGT
AGTGAATTTGTCTTCAAAGGGGAAAAGCCTCAAGTCTTATCCAGTTATTACATTTAACAT
TAAGTTTAGCATAGGTGAAAACTTTGGGGGGAGGGAGGAATTGGGAGGGTTGGAATAATA
AATACACACTACTGTATAAAATAGATGATTGAGAACTTACTGAATAGCATAGGAAATTCT
GCTCAATAGTTTGTAATAACCTATATGGGGAAAAAAAGAATGGATATATTTATATGTATA
ACTGATTCACTTTGCTGTATGACTGAAACTAATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGCTTTTCTGCATATAACAAGAAACAGGTACCAAGCATTATTGATTCATGTACCTAAA
ATAAACCAGAGTTTAAATGGGCTTCAGGCATGGTTTGATTGGGGCTTAGGCTCAGTGTCT
GTGATTTGTTAAGATTTCCCCTCTTCTGTATGTCAATTCCATTCTCAGACTACCTTTCCT
CATGGTAGCAAAATTAGCCTAGAAGTTCCAGATCATAGCAGTTCAAGTCTAGAGAGAAAT
AAATAAACCTATGTCCTGTGATGCATTCTGAACTGGCTTAGGTCACATACCTGGACCAAT
CACTAAAGTCACATGGGTGAAATGCGCTGATTGACTTGGCTAGGACATGTGTTCCATCCC
TGAACCCTAAGATATATCTCACTAGAACCAAATGGATTCCTAGTGAAATCAAGGGCTTGA
AGAGTGAATGCCATGAACCAATCAAAAATGTCTAGTATAGCTTCTTCCTTTGTGTACTGA
GCTCTCATGGACACATTTATTCCCACATACTCACTTTCAAAAATGCTCATACTTACATGT
AGTGAATTTGTCTTCAAAGGGGAAAAGCCTCAAGTCTTATCCAGTTATTACATTTAACAT
TAAGTTTAGCATAGGTGAAAACTTTGGGGGGAGGGAGGAATTGGGAGGGTTGGAATAATA
AATACACACTACTGTATAAAATAGATGATTGAGAACTTACTGAATAGCATAGGAAATTCT
GCTCAATAGTTTGTAATAACCTATATGGGGAAAAAAAGAATGGATATATTTATATGTATA
ACTGATTCACTTTGCTGTATGACTGAAACTAATATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               24-506, gnl|bosTau2|chrX (28615631-28616099)
               

               
               24-506, gnl|Hg17|chrX (56899839-56898820)
               


               
               606-816, gnl|bosTau2|chrX (40680590-40680813)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-506, gnl|bosTau2|chrX (28615631-28616099)
               

               
               24-506, gnl|Hg17|chrX (56899839-56898820)
               


               
               606-816, gnl|bosTau2|chrX (40680590-40680813)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               tra (0.123092)

	24-506, gnl\|bosTau2\|chrX (28615631-28616099)
	24-506, gnl\|Hg17\|chrX (56899839-56898820)

	606-816, gnl\|bosTau2\|chrX (40680590-40680813)