Non-Coding RNA Search

Ss1.1-rpliv0140_n8.5

Sequence:


               
               CATTAAAATTCGAAATACTTCGTACACTCCCTATGATCTTCCTGGGAATCTTCTTCGATA
CTTGAGTTTAGCCAGCACTTGCCCAAACCCAAAGTGTGGAGGAGTCTACTTTGATTGCTG
CGTCAGACAAATTAAATTTGTGGACTTCTGTGGGAAGTACCGCCTCCCCCTAATGCACTA
CTTGTGTTCACCAGAGTGCTCGTCCCCTTGCAGTTATGCCTCTCACAGCTCCACATCCCA
GAGTGAATCTGATTCGGAAGATGAAGCTAGTGTTGCTGCACACAGAATGCAGAAAGTTCT
TCTTGGTTGAAAAGGGTGCAGGGTGGGGCGAAACACTAAATACTGAACAGAGGTGGTCAG
AAAAGAGAATAGACTCTGAAGTTCACTAGAAACCTTATCTTCATTTTGAATGTCCACTGC
ACAGTTGAAGATGGTATAAAAGATTTTGTGTTTCTAGCCATTCAGCGGGAATGAATCCAG
TTCCATGTTTGAATTCTTTGGTTATAATTCACTCTGAATGGTAGTTTCAAATTTGGCTGG
TTGCAGTTTTCACTCAAGTTTTGCATGAGTCACACCACGGAATGGAATAAACCGTGAGCG
GTGTAACTTGTAACTGTTGAGAAGAAGAAAGAAATGATCAAACCTGTAATTTTTACCAGA
GTTGTCTTTGAATTTAGATTGAACGCTAAACAGGATTAGCCCTCTTTTCCTGTACTGCCC
ATAGGTCTAGATTTCAGAGTTCAGATAAGTTCACAGGTGGTTATATAGGACCAAAACCTT
TCTCACCTACTGACTGGTAAAGTAAGGGATATAATTTTACATGGGATTTTAACTCTTCAG
TTCTGCTCCTTTGTTCTAGATGATTATTGTTATCCTTATATAATCCAGCAATGACTGTAA
TAGTGCCTTAATCATAACAAGGATTTAGAAATTTATTCAAGAAATGATACCAGAGCAGCC
TATAACCTGACATACTATGCAGAATACTTTGAAATATGCTTTAGCAGAACTAGGTAAACA
GTTGTATACCTGACGTCTGAGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTAAAATTCGAAATACTTCGTACACTCCCTATGATCTTCCTGGGAATCTTCTTCGATA
CTTGAGTTTAGCCAGCACTTGCCCAAACCCAAAGTGTGGAGGAGTCTACTTTGATTGCTG
CGTCAGACAAATTAAATTTGTGGACTTCTGTGGGAAGTACCGCCTCCCCCTAATGCACTA
CTTGTGTTCACCAGAGTGCTCGTCCCCTTGCAGTTATGCCTCTCACAGCTCCACATCCCA
GAGTGAATCTGATTCGGAAGATGAAGCTAGTGTTGCTGCACACAGAATGCAGAAAGTTCT
TCTTGGTTGAAAAGGGTGCAGGGTGGGGCGAAACACTAAATACTGAACAGAGGTGGTCAG
AAAAGAGAATAGACTCTGAAGTTCACTAGAAACCTTATCTTCATTTTGAATGTCCACTGC
ACAGTTGAAGATGGTATAAAAGATTTTGTGTTTCTAGCCATTCAGCGGGAATGAATCCAG
TTCCATGTTTGAATTCTTTGGTTATAATTCACTCTGAATGGTAGTTTCAAATTTGGCTGG
TTGCAGTTTTCACTCAAGTTTTGCATGAGTCACACCACGGAATGGAATAAACCGTGAGCG
GTGTAACTTGTAACTGTTGAGAAGAAGAAAGAAATGATCAAACCTGTAATTTTTACCAGA
GTTGTCTTTGAATTTAGATTGAACGCTAAACAGGATTAGCCCTCTTTTCCTGTACTGCCC
ATAGGTCTAGATTTCAGAGTTCAGATAAGTTCACAGGTGGTTATATAGGACCAAAACCTT
TCTCACCTACTGACTGGTAAAGTAAGGGATATAATTTTACATGGGATTTTAACTCTTCAG
TTCTGCTCCTTTGTTCTAGATGATTATTGTTATCCTTATATAATCCAGCAATGACTGTAA
TAGTGCCTTAATCATAACAAGGATTTAGAAATTTATTCAAGAAATGATACCAGAGCAGCC
TATAACCTGACATACTATGCAGAATACTTTGAAATATGCTTTAGCAGAACTAGGTAAACA
GTTGTATACCTGACGTCTGAGCTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               663-1043, gnl|bosTau2|chr27 (11499973-11499595)
               

               
               663-1043, gnl|Hg17|chr3 (121532278-121531912)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               663-1043, gnl|bosTau2|chr27 (11499973-11499595)
               

               
               663-1043, gnl|Hg17|chr3 (121532278-121531912)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               lyg (0.133103)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               lyg (0.133103)

	663-1043, gnl\|bosTau2\|chr27 (11499973-11499595)
	663-1043, gnl\|Hg17\|chr3 (121532278-121531912)