Non-Coding RNA Search

Ss1.1-rplun0112_o20.5

Sequence:


               
               GAATTGGAAGAAGATGCTTATATGTAAGGTACAAATCTTCAGGACCAGATGATAGGAGCA
ATTGAGAGTTTGCTTATTCCTAGACCAGTACCATTTGCAACCATTTGTTGCATTTGGTGC
ACCTTTGATGCCAGACATCTGCCTGTAGACAGCCCTGACTTACAATTGTTCTGAAGCTCA
GATGCAACTTGAGCCCCGCCAAAACTCAGATTGAAACTTGAATCCATGGGCTGGGACTTT
AACCTGCCATCTTTTAGTTGGAATTACACACGTGGTCTCAGGATTTAATGAAGCTCACAG
GTTCTCTGTGTCTCATCGACGAAAGAATTCAGTGAGAGACCAAGTGATTGGTAAGAAGTG
GATTTATTTAGAGAGATACTCCATAGACAGAATGCAGTCTGTCTCTAAAGGCGTAGGTAG
CCCCCAAATATGGGGCGGTTAGTTTTTATGGGCTGGGTAATTTCTTAGGCTAAGGAGTGA
GAGGGTTATTCCAACTATTTGGGGGAAGGGGTGAGTACTTCCAGGACTTGGGCCACCGCC
CAGTTTTTGGCCTTTTATGGTTGGCCTCAGAACTGTCATGGTGCCTGTGGGCACGTCATT
TAGCTAATGCCTTACAGTGAGCCTATGACGAGGATCAAGGTCTGTTGGAATTCAAATCTT
CTGCAGCCTTTGGCCTACTTGGTTCTAACCTGTTTATGGTGTATCCTCAACCACGATGTC
ATTTGTTTAAACGTTGTGCCCTGCCCCCTTCCCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATTGGAAGAAGATGCTTATATGTAAGGTACAAATCTTCAGGACCAGATGATAGGAGCA
ATTGAGAGTTTGCTTATTCCTAGACCAGTACCATTTGCAACCATTTGTTGCATTTGGTGC
ACCTTTGATGCCAGACATCTGCCTGTAGACAGCCCTGACTTACAATTGTTCTGAAGCTCA
GATGCAACTTGAGCCCCGCCAAAACTCAGATTGAAACTTGAATCCATGGGCTGGGACTTT
AACCTGCCATCTTTTAGTTGGAATTACACACGTGGTCTCAGGATTTAATGAAGCTCACAG
GTTCTCTGTGTCTCATCGACGAAAGAATTCAGTGAGAGACCAAGTGATTGGTAAGAAGTG
GATTTATTTAGAGAGATACTCCATAGACAGAATGCAGTCTGTCTCTAAAGGCGTAGGTAG
CCCCCAAATATGGGGCGGTTAGTTTTTATGGGCTGGGTAATTTCTTAGGCTAAGGAGTGA
GAGGGTTATTCCAACTATTTGGGGGAAGGGGTGAGTACTTCCAGGACTTGGGCCACCGCC
CAGTTTTTGGCCTTTTATGGTTGGCCTCAGAACTGTCATGGTGCCTGTGGGCACGTCATT
TAGCTAATGCCTTACAGTGAGCCTATGACGAGGATCAAGGTCTGTTGGAATTCAAATCTT
CTGCAGCCTTTGGCCTACTTGGTTCTAACCTGTTTATGGTGTATCCTCAACCACGATGTC
ATTTGTTTAAACGTTGTGCCCTGCCCCCTTCCCTCT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               187-601, gnl|bosTau2|chr1 (33391323-33390910)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               187-601, gnl|bosTau2|chr1 (33391323-33390910)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fcc (0.197785)
               

               
               eye (0.170503)
               

               
               lun (0.150489)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               eye (0.170503)
               

               
               lun (0.150489)