Non-Coding RNA Search

Ss1.1-rplun0112_p21.5

Sequence:


               
               TCTGTGAATTCTGGGATGTGCATTGATGGCCACTGCAGGGGGGATGTCTAGCTCTTCATT
TTCCTCCTAATATAAACCTGATATATATAATGTTCCTTAATTTCATTTGCACCTGGTTTC
ACGTATGAAATATTTCATCAATATTTATGTGGTAGTTATATAACCTCTGCAATTGTAAAT
ATGGGGCTAGGCTGAAATACTTCCCCTACCTTGTAATTTACAAGGCTATAGGGACTCTTT
CATTCGAATTGGCATGCCCCGTTTGCCTAATTAAATCAATCATTACTTCAAGTCTATCTG
TCGAAATAGGGAAAAATTTCATTTTACTCTTCATCTTAGCTTATTGCGTATATTTTATTA
AAGAATTTTGTTCAATTTTGGCAATAAACTGAACATAATGGCAACAGGCTTTTCTTTGGG
AACAAAATTTGGAAAGTAAACAAACGTATTTCTTAAAAATGACGAATGGCATCCTATTGA
GTCTGAGGGAGTAATTTACAAAAAGATAAAGCCTTAGAACCAAAATGGTGCTTTTCTCAT
CCCTGGAAGTCCTGGTGACTATTCATTCATTTAATAGCCCCCTGATCATTTCATTTTCTT
TGTAGTTCAAAGAAAATAGCGTACAGAAGAGTTAATGATTCTCACATAAATATTCCCTGG
AAACAATCCCTTTTTCTCCTTAGGGTCTTGAGGCAGCATTTTCAAATTCAGAGTACGCAG
ATAATTCCAGTGATGGGACATTCCCCTTTCTCTTAAAAGTGTTCACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGTGAATTCTGGGATGTGCATTGATGGCCACTGCAGGGGGGATGTCTAGCTCTTCATT
TTCCTCCTAATATAAACCTGATATATATAATGTTCCTTAATTTCATTTGCACCTGGTTTC
ACGTATGAAATATTTCATCAATATTTATGTGGTAGTTATATAACCTCTGCAATTGTAAAT
ATGGGGCTAGGCTGAAATACTTCCCCTACCTTGTAATTTACAAGGCTATAGGGACTCTTT
CATTCGAATTGGCATGCCCCGTTTGCCTAATTAAATCAATCATTACTTCAAGTCTATCTG
TCGAAATAGGGAAAAATTTCATTTTACTCTTCATCTTAGCTTATTGCGTATATTTTATTA
AAGAATTTTGTTCAATTTTGGCAATAAACTGAACATAATGGCAACAGGCTTTTCTTTGGG
AACAAAATTTGGAAAGTAAACAAACGTATTTCTTAAAAATGACGAATGGCATCCTATTGA
GTCTGAGGGAGTAATTTACAAAAAGATAAAGCCTTAGAACCAAAATGGTGCTTTTCTCAT
CCCTGGAAGTCCTGGTGACTATTCATTCATTTAATAGCCCCCTGATCATTTCATTTTCTT
TGTAGTTCAAAGAAAATAGCGTACAGAAGAGTTAATGATTCTCACATAAATATTCCCTGG
AAACAATCCCTTTTTCTCCTTAGGGTCTTGAGGCAGCATTTTCAAATTCAGAGTACGCAG
ATAATTCCAGTGATGGGACATTCCCCTTTCTCTTAAAAGTGTTCACTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-768, gnl|bosTau2|chr3 (12129195-12128442)
               

               
               1-768, gnl|Hg17|chr12 (99459710-99460469)
               

               
               1-768, gnl|Mm7|chr10 (89013507-89012839)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-768, gnl|bosTau2|chr3 (12129195-12128442)
               

               
               1-768, gnl|Hg17|chr12 (99459710-99460469)
               

               
               1-768, gnl|Mm7|chr10 (89013507-89012839)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lun (0.300978)
               

               
               sin (0.174948)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.300978)
               

               
               sin (0.174948)

	1-768, gnl\|bosTau2\|chr3 (12129195-12128442)
	1-768, gnl\|Hg17\|chr12 (99459710-99460469)
	1-768, gnl\|Mm7\|chr10 (89013507-89012839)