Non-Coding RNA Search

Ss1.1-rplun0117_i1.5

Sequence:


               
               GATGAAAAGCCTAGAGGCTAGTGACTTCAAACATATCAAAAGCACTGTTTATTGACTTTT
GTGTTACATAATTTAGAAACTGAGAATGCCAAGTGGCTGTAAATGTTAGAACGTGACATC
GAGGAAGCACGTGGTGACTTCAGCCTTGCCTTCACTTAAGTGCCTTCTGCCTTAGCTCTC
AAAAAAGGGACTTCCTTCAGTCAAGTAACAAGAGAAGCACCTTGAAGCATTGAATAAATC
AGCTCGACTAATCTAGGAGATTTGAGCTGTACCGAAGAACATGTGCTGGGAAATAACTGA
CCTTTTAGTCCAGTAGAATTTTCTGCAGTGAAGAAAATGTTCTCTATCTGTGCTATCCGA
TTTGGTAGTCATTAGCCGTTCGTGGCTACCGAACACCTGAAATGTGGTTATTATGACTGA
GCCTCTGAATTTTTAAATTTTAATTAACTTTTATTTTTAATCTAAGTTTAAATAACCATA
CATGGCTAGTGGCCACTGTACCGGAGAGTACAGCTTTAGCATATTTATCAGTGTGCAAGG
TTATGGTAAAGACTAAAATGAAATGCAAAGGATTTCAAGTGTCTAGCAGTGGGCCTGGGA
CATAGCATATACTCAATGAATAGTCTCTTCTTTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGAAAAGCCTAGAGGCTAGTGACTTCAAACATATCAAAAGCACTGTTTATTGACTTTT
GTGTTACATAATTTAGAAACTGAGAATGCCAAGTGGCTGTAAATGTTAGAACGTGACATC
GAGGAAGCACGTGGTGACTTCAGCCTTGCCTTCACTTAAGTGCCTTCTGCCTTAGCTCTC
AAAAAAGGGACTTCCTTCAGTCAAGTAACAAGAGAAGCACCTTGAAGCATTGAATAAATC
AGCTCGACTAATCTAGGAGATTTGAGCTGTACCGAAGAACATGTGCTGGGAAATAACTGA
CCTTTTAGTCCAGTAGAATTTTCTGCAGTGAAGAAAATGTTCTCTATCTGTGCTATCCGA
TTTGGTAGTCATTAGCCGTTCGTGGCTACCGAACACCTGAAATGTGGTTATTATGACTGA
GCCTCTGAATTTTTAAATTTTAATTAACTTTTATTTTTAATCTAAGTTTAAATAACCATA
CATGGCTAGTGGCCACTGTACCGGAGAGTACAGCTTTAGCATATTTATCAGTGTGCAAGG
TTATGGTAAAGACTAAAATGAAATGCAAAGGATTTCAAGTGTCTAGCAGTGGGCCTGGGA
CATAGCATATACTCAATGAATAGTCTCTTCTTTATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-635, gnl|bosTau2|chr3 (7290408-7291024)
               

               
               3-635, gnl|Hg17|chr1 (159298309-159298929)
               

               
               3-635, gnl|Mm7|chr1 (170120784-170120215)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-635, gnl|bosTau2|chr3 (7290408-7291024)
               

               
               3-635, gnl|Hg17|chr1 (159298309-159298929)
               

               
               3-635, gnl|Mm7|chr1 (170120784-170120215)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	3-635, gnl\|bosTau2\|chr3 (7290408-7291024)
	3-635, gnl\|Hg17\|chr1 (159298309-159298929)
	3-635, gnl\|Mm7\|chr1 (170120784-170120215)