Non-Coding RNA Search

Ss1.1-rplun0120_k3.5

Sequence:


               
               CTCATGGCATATTTTGTGTGTTCAAACAAAGGTGGAAACTTCCATTGATGTAAAAAAAAT
TTATACATGATGGAAGAATCCAGAAACCCTCAAAAGGTCACCTTTAAGCTTTTTAGAATT
AAAGTATAGGTTTAATTTTTCTACATTTTGGTGGTTAAAATACAGGAATAGTAATTTTTT
TTTAGATTTTGATGGGAAAATATGCCCAGGAAACTATGTAGTAAAAGGTACTGGATTTTT
TTTTTTTTTTGTTTTTTTACACTGAATTTTTCTTTACACCCAAAGAATTCCTTAAAGATT
TGCATATTATGTTAGAGATCAAAAAAGGCAGGACTGACCATTGAATCTTTTCACACGGCA
CAATTTCTAGTTTTCTCTGTATGATGTGTCACTTAGGCTTGGAGGGGAATACAAATCAGA
GGCTTGGAATTTGGGAGCTGTCACTGCAGGCTGTTGAGATTATCCTTCCCAGCTGGCATT
GTATGATGTTCAGTCTAAGGACATTGTTTCATCCTGATCCCAGGATTTGTGTTATGATTC
TAAAATTCTCCAAGGCCGTTTCTTGTGTTGCTAGTGAATTTATGCACATTAGAGGCACTC
ACTGACATTTCGGAAAAGCAGTCTCCAACCTTTCTGAACACTCATCTTGATCAATAAAAG
GTTTTGAACATAAATCCCTTTTGCAAATTCATATGCTGTATGCTAAGTTATATATTGCTA
TGCTAAAGTCATATGTTCATTATAAGATATATGCAAAACAGAAAATAAGGGCAGCATAAA
AATATGTCTTGAGTAGATATTCTGGTATCTTCTTCCTGTACCCAGTAGATTGTCTTGTGC
CCTGCCCTTCACAGTGTGTACTCTATTTTGAAGACCCCTCACTGATCAAGGTATTCTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCATGGCATATTTTGTGTGTTCAAACAAAGGTGGAAACTTCCATTGATGTAAAAAAAAT
TTATACATGATGGAAGAATCCAGAAACCCTCAAAAGGTCACCTTTAAGCTTTTTAGAATT
AAAGTATAGGTTTAATTTTTCTACATTTTGGTGGTTAAAATACAGGAATAGTAATTTTTT
TTTAGATTTTGATGGGAAAATATGCCCAGGAAACTATGTAGTAAAAGGTACTGGATTTTT
TTTTTTTTTTGTTTTTTTACACTGAATTTTTCTTTACACCCAAAGAATTCCTTAAAGATT
TGCATATTATGTTAGAGATCAAAAAAGGCAGGACTGACCATTGAATCTTTTCACACGGCA
CAATTTCTAGTTTTCTCTGTATGATGTGTCACTTAGGCTTGGAGGGGAATACAAATCAGA
GGCTTGGAATTTGGGAGCTGTCACTGCAGGCTGTTGAGATTATCCTTCCCAGCTGGCATT
GTATGATGTTCAGTCTAAGGACATTGTTTCATCCTGATCCCAGGATTTGTGTTATGATTC
TAAAATTCTCCAAGGCCGTTTCTTGTGTTGCTAGTGAATTTATGCACATTAGAGGCACTC
ACTGACATTTCGGAAAAGCAGTCTCCAACCTTTCTGAACACTCATCTTGATCAATAAAAG
GTTTTGAACATAAATCCCTTTTGCAAATTCATATGCTGTATGCTAAGTTATATATTGCTA
TGCTAAAGTCATATGTTCATTATAAGATATATGCAAAACAGAAAATAAGGGCAGCATAAA
AATATGTCTTGAGTAGATATTCTGGTATCTTCTTCCTGTACCCAGTAGATTGTCTTGTGC
CCTGCCCTTCACAGTGTGTACTCTATTTTGAAGACCCCTCACTGATCAAGGTATTCTCAG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               2-720, gnl|bosTau2|chr16 (1488715-1487998)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-720, gnl|bosTau2|chr16 (1488715-1487998)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)