Ss1.1-rplun0124_f16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGAAATTGCCTCCTGCTGATCTAAAGATGCTGTCCCTCGAAGAGGAGGTCGTCACTGAA AGGCTGAGCCCCTCGTTCTTAGACCTGTTCCGCACGCAGAACCTGAGGAAGTACACCTTC ATCCTGATGTACCTGTGGTTCACCAGCTCTGTGCTCTACCAAGGCCTCATCATGCACGTG GGAGCCACGGGCGGGAGCCTCTACCTGGATTTCCTGTACTCCGCTCTGGTTGAATTCCCA GCCGCCTTCGTCATTCTCCTCATCATCGACCGCTTCGGCCGGCTCTACCTGCTGGCCGGC TCCAACCTGCTGGCGGGGGCAGCCTGTTTCTTCATGATCTTCATCTCACATGATCTGCAC TGGCTGAGCATCGTGGCAGCTTGCATTGGCCGAATGGGTATCACCATCGTCTTCCAGATG GTGTGCCTGGTGAGCGCCGAGCTGTACCCCACCTTCATCAGGAACCTCGGCGTGATGGTG TGCTCCTCCCTGTGCGATCTGGGCGGGGTGGTCGCGCCCTTCCTGGTCTTCAGGCTGACG GAGGTTTGGCGAGGCTTGCCCCTCGTTTTGTTTGCGGCACTGGGCCTGGTTGCGGGGGGA ATGTCGCTGCTTCTTCCGGAGACCAAAGGGGTCGCTTTGCCAGAGACCATCGAGGAGGTG GAGAGGCTGGGGAAGAAAGCAAAGCCCAGAGACAACATGATTTACCTTCAGGTTAAAATG CCAGAACCTGCANGCCTCTGAGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGAAATTGCCTCCTGCTGATCTAAAGATGCTGTCCCTCGAAGAGGAGGTCGTCACTGAA AGGCTGAGCCCCTCGTTCTTAGACCTGTTCCGCACGCAGAACCTGAGGAAGTACACCTTC ATCCTGATGTACCTGTGGTTCACCAGCTCTGTGCTCTACCAAGGCCTCATCATGCACGTG GGAGCCACGGGCGGGAGCCTCTACCTGGATTTCCTGTACTCCGCTCTGGTTGAATTCCCA GCCGCCTTCGTCATTCTCCTCATCATCGACCGCTTCGGCCGGCTCTACCTGCTGGCCGGC TCCAACCTGCTGGCGGGGGCAGCCTGTTTCTTCATGATCTTCATCTCACATGATCTGCAC TGGCTGAGCATCGTGGCAGCTTGCATTGGCCGAATGGGTATCACCATCGTCTTCCAGATG GTGTGCCTGGTGAGCGCCGAGCTGTACCCCACCTTCATCAGGAACCTCGGCGTGATGGTG TGCTCCTCCCTGTGCGATCTGGGCGGGGTGGTCGCGCCCTTCCTGGTCTTCAGGCTGACG GAGGTTTGGCGAGGCTTGCCCCTCGTTTTGTTTGCGGCACTGGGCCTGGTTGCGGGGGGA ATGTCGCTGCTTCTTCCGGAGACCAAAGGGGTCGCTTTGCCAGAGACCATCGAGGAGGTG GAGAGGCTGGGGAAGAAAGCAAAGCCCAGAGACAACATGATTTACCTTCAGGTTAAAATG CCAGAACCTGCANGCCTCTGAGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 137-350, gnl|bosTau2|chr9 (61356736-61356523) | |
| 137-350, gnl|canFam2|chr1 (52327469-52327757) | |
| 137-350, gnl|danRer3|chr20 (50037121-50037385) | |
| 137-350, gnl|dasNov1|scaffold_64468 (7125-7372) | |
| 137-350, gnl|echTel1|scaffold_187744 (864-1146) | |
| 137-350, gnl|fr1|chrUn (154831369-154831615) | |
| 137-350, gnl|galGal2|chr3 (41588969-41588692) | |
| 137-350, gnl|hg17|chr6 (160531058-160531339) | |
| 137-350, gnl|Hg17|chr6 (160531095-160531308) | |
| 137-350, gnl|loxAfr1|scaffold_22949 (18691-18409) | |
| 137-350, gnl|mm7|chr17 (11376837-11376574) | |
| 137-350, gnl|Mm7|chr17 (11376808-11376595) | |
| 137-350, gnl|monDom2|scaffold_0 (43141646-43141381) | |
| 137-350, gnl|oryCun1|scaffold_175790 (96374-96123) | |
| 137-350, gnl|panTro1|chr5 (164393157-164393430) | |
| 137-350, gnl|rheMac2|chr4 (157135495-157135768) | |
| 137-350, gnl|rn3|chr1 (42369927-42370190) | |
| 137-350, gnl|tetNig1|chr14 (9132654-9132423) | |
| 137-350, gnl|xenTro1|scaffold_41 (2864745-2864486) | |
| 454-574, gnl|bosTau2|chr9 (61342700-61342580) | |
| 454-574, gnl|canFam2|chr1 (52336810-52336957) | |
| 454-574, gnl|danRer3|chr2 (41392497-41392349) | |
| 454-574, gnl|dasNov1|scaffold_56750 (295-144) | |
| 454-574, gnl|echTel1|scaffold_226758 (7250-7118) | |
| 454-574, gnl|fr1|chrUn (154831876-154832023) | |
| 454-574, gnl|galGal2|chr3 (41587031-41586898) | |
| 454-574, gnl|hg17|chr6 (160546207-160546357) | |
| 454-574, gnl|Hg17|chr6 (160546233-160546353) | |
| 454-574, gnl|loxAfr1|scaffold_22949 (10518-10379) | |
| 454-574, gnl|mm7|chr17 (11369562-11369417) | |
| 454-574, gnl|Mm7|chr17 (11369537-11369419) | |
| 454-574, gnl|oryCun1|scaffold_175790 (89786-89640) | |
| 454-574, gnl|panTro1|chr5_random (15182093-15182243) | |
| 454-574, gnl|rheMac2|chr4 (157150362-157150512) | |
| 454-574, gnl|rn3|chr1 (42376606-42376753) | |
| 454-574, gnl|tetNig1|chr14 (9132145-9132018) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 137-350, gnl|bosTau2|chr9 (61356736-61356523) | |
| 137-350, gnl|canFam2|chr1 (52327469-52327757) | |
| 137-350, gnl|danRer3|chr20 (50037121-50037385) | |
| 137-350, gnl|dasNov1|scaffold_64468 (7125-7372) | |
| 137-350, gnl|echTel1|scaffold_187744 (864-1146) | |
| 137-350, gnl|fr1|chrUn (154831369-154831615) | |
| 137-350, gnl|galGal2|chr3 (41588969-41588692) | |
| 137-350, gnl|hg17|chr6 (160531058-160531339) | |
| 137-350, gnl|Hg17|chr6 (160531095-160531308) | |
| 137-350, gnl|loxAfr1|scaffold_22949 (18691-18409) | |
| 137-350, gnl|mm7|chr17 (11376837-11376574) | |
| 137-350, gnl|Mm7|chr17 (11376808-11376595) | |
| 137-350, gnl|monDom2|scaffold_0 (43141646-43141381) | |
| 137-350, gnl|oryCun1|scaffold_175790 (96374-96123) | |
| 137-350, gnl|panTro1|chr5 (164393157-164393430) | |
| 137-350, gnl|rheMac2|chr4 (157135495-157135768) | |
| 137-350, gnl|rn3|chr1 (42369927-42370190) | |
| 137-350, gnl|tetNig1|chr14 (9132654-9132423) | |
| 137-350, gnl|xenTro1|scaffold_41 (2864745-2864486) | |
| 454-574, gnl|bosTau2|chr9 (61342700-61342580) | |
| 454-574, gnl|canFam2|chr1 (52336810-52336957) | |
| 454-574, gnl|danRer3|chr2 (41392497-41392349) | |
| 454-574, gnl|dasNov1|scaffold_56750 (295-144) | |
| 454-574, gnl|echTel1|scaffold_226758 (7250-7118) | |
| 454-574, gnl|fr1|chrUn (154831876-154832023) | |
| 454-574, gnl|galGal2|chr3 (41587031-41586898) | |
| 454-574, gnl|hg17|chr6 (160546207-160546357) | |
| 454-574, gnl|Hg17|chr6 (160546233-160546353) | |
| 454-574, gnl|loxAfr1|scaffold_22949 (10518-10379) | |
| 454-574, gnl|mm7|chr17 (11369562-11369417) | |
| 454-574, gnl|Mm7|chr17 (11369537-11369419) | |
| 454-574, gnl|oryCun1|scaffold_175790 (89786-89640) | |
| 454-574, gnl|panTro1|chr5_random (15182093-15182243) | |
| 454-574, gnl|rheMac2|chr4 (157150362-157150512) | |
| 454-574, gnl|rn3|chr1 (42376606-42376753) | |
| 454-574, gnl|tetNig1|chr14 (9132145-9132018) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.330469) | |
| lun (0.150489) |