Non-Coding RNA Search

Ss1.1-rplun0128_f19.5

Sequence:


               
               AGAGAAGAGGTAGCTCCCTTATGCTGAAGACACTTTTTCGGAGAAAGGAGCATTTGTGAG
CTGTTATCAGCTAACGCTCACCGTGGCTGGTGGGTAGGTGCACTAACTCAGTCAATGGGA
TCCGAGTTGGGCAGAGGAGGCTTAGATGAAATGGCAGCATCTGACAGTTCTTTTCACTGA
AGTCGAGAATCTGATGCTTCTGCTCTGACCTTCTTCTGTGGCTTCTGTCGGGGAAGAAAA
GGTCATCTTGGAAGCCATGATTAATGGCGCTATTGATAAAGATGTGAGATTTGCGACACT
ACTAATGCTATTCACTCCTCACCGTGTGTATTCTCAGAATCTTCTCGTCTTGAGCAATTT
GTCTTAGGACTGCTCATCTACTGGTTCAAATGCTATGTTCTCTTTCCAAAAGAGTAAATG
AACTCCCAAGTCTTGCCTACAAATATTATCTCTTTCAGCATCTTGTAAATTATCTGTGAA
AAGAGCTACTGTGATATATGAAGGAGAGAGAGTCAATATCCAAGATAAATTTAAGAATGG
AATGCTGCATGGCCAAAAAATTTCTTTCTTCTGCAAGAATAAGGAAAAGAAGTGCAGCTA
TACGGAGGATGCCCAGTGCATAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGAAGAGGTAGCTCCCTTATGCTGAAGACACTTTTTCGGAGAAAGGAGCATTTGTGAG
CTGTTATCAGCTAACGCTCACCGTGGCTGGTGGGTAGGTGCACTAACTCAGTCAATGGGA
TCCGAGTTGGGCAGAGGAGGCTTAGATGAAATGGCAGCATCTGACAGTTCTTTTCACTGA
AGTCGAGAATCTGATGCTTCTGCTCTGACCTTCTTCTGTGGCTTCTGTCGGGGAAGAAAA
GGTCATCTTGGAAGCCATGATTAATGGCGCTATTGATAAAGATGTGAGATTTGCGACACT
ACTAATGCTATTCACTCCTCACCGTGTGTATTCTCAGAATCTTCTCGTCTTGAGCAATTT
GTCTTAGGACTGCTCATCTACTGGTTCAAATGCTATGTTCTCTTTCCAAAAGAGTAAATG
AACTCCCAAGTCTTGCCTACAAATATTATCTCTTTCAGCATCTTGTAAATTATCTGTGAA
AAGAGCTACTGTGATATATGAAGGAGAGAGAGTCAATATCCAAGATAAATTTAAGAATGG
AATGCTGCATGGCCAAAAAATTTCTTTCTTCTGCAAGAATAAGGAAAAGAAGTGCAGCTA
TACGGAGGATGCCCAGTGCATAGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|11513726|pdb|1G4G|A

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|11513726|pdb|1G4G|A

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               200-624, gnl|bosTau2|chr19 (50026599-50026184)
               

               
               200-624, gnl|Hg17|chr17 (61641478-61641065)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               200-624, gnl|bosTau2|chr19 (50026599-50026184)
               

               
               200-624, gnl|Hg17|chr17 (61641478-61641065)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.300978)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.300978)

	200-624, gnl\|bosTau2\|chr19 (50026599-50026184)
	200-624, gnl\|Hg17\|chr17 (61641478-61641065)