Non-Coding RNA Search

Ss1.1-rplun0128_i1.5

Sequence:


               
               GCTTTATAGCTTTGCAGTCCTGGTAGCCGCCGTTCTCCTCTGTGAGCAGGATGTCTTCGC
GTTTCAGAGATTGTGCTCTGGCAGCCAGTAACAGCTGATGTAATTGAGCCCCTGCTCATT
TGCCCCTCGTGAAACCCATTTTGTCCACTGGCCTGGGGGAGGTCAAGGTCAGGTCTTTCT
GAAACATTCCATGTTGCCCTTCCAAATGGGAGATTCAGTGCAATAAGGATCTCACTTAAA
TCCAGGCTCTTTCTTTTCTTTTCTGGCTCTAGTTTTATTACTGAGAAAACTCTGGATGAT
ATGTATATTCAGTGACTATGAAAATGAAAGAAATAGACTCAATTAAAAAAACTAATTATT
TACATGTCAATACCACATGGTTTATATTTCTCCTGTCTTCACCTATATGCTACATGGCTA
TGGATTATTTACTTTTCTCTTGTACATGCAACGTGGGAGGGGGCAGCGGGCAAAGGTATA
GATGGATTGGAAAGGAGGTTTGGGTTGTGTCTGGGTGTTCAGCATGGAATGGAAAGGAAG
GATAGCTGTGTTTTAAAGAAGAAACACATGGAATTTCCCATTGTGGCTCAGTGGTTAATG
AACCCGACTAGTATCCATGAGGTATCGGGTTCGATCCCTGGCCTCACTCAGTGGGTTAAA
GATCCAGCGTTGCCATTGCCGTGAGCTGTGGTGTAGGTTGAGGATGCGAGGGCTTGGACC
CCGAGTTGCTGTGGCAGCTCTGAT------------------------------------
------------------------AAAAGTAAAGCGATAAAGAAGACACACATGAACATA
TCTAATTCTTTTTTTTTTTTTTCTAATTCTCATTTGTCTCTGGAGAGTGGTTCCCTTAGG
CTTTTCTACTATAAGCCACTTGAAAGCACACAAAAGAACTCATGCTCTAGCATATACAAA
ACTTGATGAAAATAGTTCGTCTGTATTGTATGACCGTAATTGATTAGCTCGTCAATATGG
GGATTTTTCAAAATTGATACTGCTTCCTTTTGGAATGATCTTCTCCCTCCCACACACTTT
GTTTTGCTTCTGTGATCTTTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTATAGCTTTGCAGTCCTGGTAGCCGCCGTTCTCCTCTGTGAGCAGGATGTCTTCGC
GTTTCAGAGATTGTGCTCTGGCAGCCAGTAACAGCTGATGTAATTGAGCCCCTGCTCATT
TGCCCCTCGTGAAACCCATTTTGTCCACTGGCCTGGGGGAGGTCAAGGTCAGGTCTTTCT
GAAACATTCCATGTTGCCCTTCCAAATGGGAGATTCAGTGCAATAAGGATCTCACTTAAA
TCCAGGCTCTTTCTTTTCTTTTCTGGCTCTAGTTTTATTACTGAGAAAACTCTGGATGAT
ATGTATATTCAGTGACTATGAAAATGAAAGAAATAGACTCAATTAAAAAAACTAATTATT
TACATGTCAATACCACATGGTTTATATTTCTCCTGTCTTCACCTATATGCTACATGGCTA
TGGATTATTTACTTTTCTCTTGTACATGCAACGTGGGAGGGGGCAGCGGGCAAAGGTATA
GATGGATTGGAAAGGAGGTTTGGGTTGTGTCTGGGTGTTCAGCATGGAATGGAAAGGAAG
GATAGCTGTGTTTTAAAGAAGAAACACATGGAATTTCCCATTGTGGCTCAGTGGTTAATG
AACCCGACTAGTATCCATGAGGTATCGGGTTCGATCCCTGGCCTCACTCAGTGGGTTAAA
GATCCAGCGTTGCCATTGCCGTGAGCTGTGGTGTAGGTTGAGGATGCGAGGGCTTGGACC
CCGAGTTGCTGTGGCAGCTCTGAT------------------------------------
------------------------AAAAGTAAAGCGATAAAGAAGACACACATGAACATA
TCTAATTCTTTTTTTTTTTTTTCTAATTCTCATTTGTCTCTGGAGAGTGGTTCCCTTAGG
CTTTTCTACTATAAGCCACTTGAAAGCACACAAAAGAACTCATGCTCTAGCATATACAAA
ACTTGATGAAAATAGTTCGTCTGTATTGTATGACCGTAATTGATTAGCTCGTCAATATGG
GGATTTTTCAAAATTGATACTGCTTCCTTTTGGAATGATCTTCTCCCTCCCACACACTTT
GTTTTGCTTCTGTGATCTTTTTCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-550, gnl|bosTau2|chr12 (6697458-6696894)
               

               
               1-550, gnl|Hg17|chr13 (45577140-45576591)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-550, gnl|bosTau2|chr12 (6697458-6696894)
               

               
               1-550, gnl|Hg17|chr13 (45577140-45576591)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	1-550, gnl\|bosTau2\|chr12 (6697458-6696894)
	1-550, gnl\|Hg17\|chr13 (45577140-45576591)