Non-Coding RNA Search

Ss1.1-rplun0128_i21.5

Sequence:


               
               GGGAAAAGTAATTGACTAATTTTATGAGGGGAGGATCTGGTTGTTCTGAAGACCTGAGCA
TCGGCTTTGGAGTCTCTTCCTTTTCACAATTTCTTTCCTAATTCTCTCACTTCCTTGTTC
TCATGAGTCCAAATTTTAGAAGTCTCCTATTGAGGAGATAAAAAACAGAAAGTCAGCTTC
TAGGTGTACAACCAAATACTCATGAGGCATTGGGAAAATGGGAGCATTGATTCATTCATT
CGTGTATGCAGGATCCGTTCATTCCACTAGCATTTATTGACTGCCTTCATTGAACTAGCC
CCTATGTGGGCATATAGCATCCTGCTTTCTCCCAATACTGTTCTAGTCCACTCGGTTCTC
AAGTTTCAAAAGACTAGGACTAAGTCTTTATTCCTCTTTCTGCATATCATCAAGCCTGTC
AAATTCCCCTCCTAAATATTTATTATATTCATTCCCTTCTCCATACCCATTGCTGCCATT
CTAGTTGGGAATCTACAGCTCTCGCAATGGACAAGGGCAATCGCCTCCTTCCTGTTTTCC
ATCTTGCCTTCAGCCGTCTCTGTTCCCACCCCCTTATGTTCCAAACTACTTCTAAACTCA
GAATGTGTGCAGTTTTCCCTTTGAGAATCTACAAAATCCTTTTGATGAGCAATTTGGTCA
TTGGAGGAGTTACGGAAATATTCATGTGTTTTAAGGCAAGACCACCACGCCAATGATTTA
TCCCAAGAAAATTATTTTTGAAAAAAAATAGCAATATATAGAAATCCAACTGTATACTTA
GTAGCAGTGGGAAATTCAGAAAATATTTAGCAGTGGAAGCCTGAACAAGCAAGGTGGTTT
ATTAGGACAATGGAATAAAATGCAATGATTGCATAATAAGCATACTATCTCTACATTTAC
AAATATATAAGTGAATTTTTAAGATGGAAAAACAATCCTATGATGATAATTATGCAAAAT
ATATGCATATACATTTTGAACAAATCTTGAGCTATATGCATTATTTGTACATATTTGTTC
TCCCCAACTGATCTATAAAATTTAATAAAAATGCTAAACACAAAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAAAGTAATTGACTAATTTTATGAGGGGAGGATCTGGTTGTTCTGAAGACCTGAGCA
TCGGCTTTGGAGTCTCTTCCTTTTCACAATTTCTTTCCTAATTCTCTCACTTCCTTGTTC
TCATGAGTCCAAATTTTAGAAGTCTCCTATTGAGGAGATAAAAAACAGAAAGTCAGCTTC
TAGGTGTACAACCAAATACTCATGAGGCATTGGGAAAATGGGAGCATTGATTCATTCATT
CGTGTATGCAGGATCCGTTCATTCCACTAGCATTTATTGACTGCCTTCATTGAACTAGCC
CCTATGTGGGCATATAGCATCCTGCTTTCTCCCAATACTGTTCTAGTCCACTCGGTTCTC
AAGTTTCAAAAGACTAGGACTAAGTCTTTATTCCTCTTTCTGCATATCATCAAGCCTGTC
AAATTCCCCTCCTAAATATTTATTATATTCATTCCCTTCTCCATACCCATTGCTGCCATT
CTAGTTGGGAATCTACAGCTCTCGCAATGGACAAGGGCAATCGCCTCCTTCCTGTTTTCC
ATCTTGCCTTCAGCCGTCTCTGTTCCCACCCCCTTATGTTCCAAACTACTTCTAAACTCA
GAATGTGTGCAGTTTTCCCTTTGAGAATCTACAAAATCCTTTTGATGAGCAATTTGGTCA
TTGGAGGAGTTACGGAAATATTCATGTGTTTTAAGGCAAGACCACCACGCCAATGATTTA
TCCCAAGAAAATTATTTTTGAAAAAAAATAGCAATATATAGAAATCCAACTGTATACTTA
GTAGCAGTGGGAAATTCAGAAAATATTTAGCAGTGGAAGCCTGAACAAGCAAGGTGGTTT
ATTAGGACAATGGAATAAAATGCAATGATTGCATAATAAGCATACTATCTCTACATTTAC
AAATATATAAGTGAATTTTTAAGATGGAAAAACAATCCTATGATGATAATTATGCAAAAT
ATATGCATATACATTTTGAACAAATCTTGAGCTATATGCATTATTTGTACATATTTGTTC
TCCCCAACTGATCTATAAAATTTAATAAAAATGCTAAACACAAAATAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               10-1063, gnl|bosTau2|chr17 (494897-495990)
               

               
               10-1063, gnl|Hg17|chr4 (155882323-155880526)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-1063, gnl|bosTau2|chr17 (494897-495990)
               

               
               10-1063, gnl|Hg17|chr4 (155882323-155880526)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (1.80587)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (1.80587)

	10-1063, gnl\|bosTau2\|chr17 (494897-495990)
	10-1063, gnl\|Hg17\|chr4 (155882323-155880526)