Non-Coding RNA Search

Ss1.1-rplun0129_k8.5

Sequence:


               
               AGGAGTGAAACACTAAAACTGTATTAAGAGTCTAGAATCATTTTGGGTAAAAGCAAACAT
GACTTTTTCTCAAAAATCCTAGTGGTACCATTACAATGCCTGATATTCATAATACCGTCC
TAACATAAATATACTGCCCACATGAAATCCTAGTTTGAAATCCTTCCACGGATCCCCACT
TCATACAAGATGTAACTTACGCTCTATCATGACACTGCCTCCCATAACCTGGTGGCCTTC
TTACCTCTTTCAGGTACAACTGTTAGTATAGCTACTGGCATCCTAATTATAACACTACAA
AATAACTGTCAGATGTTATTATTAGTTATTTTCATTATTATGAAAACCATGAAGCATACT
GACTAGCATATCCTCAAGAGCTATGAAGACCCTTCTCAGAGAAGCAAGGACACCAAAGAA
TTTGGCAGTGTATGAGAAATAAGGCAGGCTTTGCCATGGATAATGGAGCATGAAACCAAG
GGAAATCAGAAAGACAGCTTCAGAATGATAACCAAGCGATTACTTTTTATTCATGTGTCC
ACTCACCAAGGATGGACAAAGAAGCAGACACCAGATACAATAAAGTAGGTCAGCATTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGTGAAACACTAAAACTGTATTAAGAGTCTAGAATCATTTTGGGTAAAAGCAAACAT
GACTTTTTCTCAAAAATCCTAGTGGTACCATTACAATGCCTGATATTCATAATACCGTCC
TAACATAAATATACTGCCCACATGAAATCCTAGTTTGAAATCCTTCCACGGATCCCCACT
TCATACAAGATGTAACTTACGCTCTATCATGACACTGCCTCCCATAACCTGGTGGCCTTC
TTACCTCTTTCAGGTACAACTGTTAGTATAGCTACTGGCATCCTAATTATAACACTACAA
AATAACTGTCAGATGTTATTATTAGTTATTTTCATTATTATGAAAACCATGAAGCATACT
GACTAGCATATCCTCAAGAGCTATGAAGACCCTTCTCAGAGAAGCAAGGACACCAAAGAA
TTTGGCAGTGTATGAGAAATAAGGCAGGCTTTGCCATGGATAATGGAGCATGAAACCAAG
GGAAATCAGAAAGACAGCTTCAGAATGATAACCAAGCGATTACTTTTTATTCATGTGTCC
ACTCACCAAGGATGGACAAAGAAGCAGACACCAGATACAATAAAGTAGGTCAGCATTCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-501, gnl|bosTau2|chr3 (9661039-9660531)
               

               
               1-501, gnl|Hg17|chr1 (156372140-156372729)
               

               
               1-501, gnl|Mm7|chr1 (172864824-172864286)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-501, gnl|bosTau2|chr3 (9661039-9660531)
               

               
               1-501, gnl|Hg17|chr1 (156372140-156372729)
               

               
               1-501, gnl|Mm7|chr1 (172864824-172864286)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.300978)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.300978)

	1-501, gnl\|bosTau2\|chr3 (9661039-9660531)
	1-501, gnl\|Hg17\|chr1 (156372140-156372729)
	1-501, gnl\|Mm7\|chr1 (172864824-172864286)